Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PCP4P48539 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PCP4P48539 ARAP1-207ENST00000429686 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
PCP4P48539 TCF4-204ENST00000457482 2372 ntTSL 1 (best) BASIC8.79□□□□□ -1
PCP4P48539 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
PCP4P48539 AC091152.4-201ENST00000623480 3483 ntBASIC8.79□□□□□ -1
PCP4P48539 THAP1-201ENST00000254250 2161 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PCP4P48539 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PCP4P48539 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PCP4P48539 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PCP4P48539 AC006372.4-201ENST00000624122 1543 ntBASIC8.79□□□□□ -1
PCP4P48539 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PCP4P48539 FCAMR-201ENST00000324852 2605 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
PCP4P48539 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PCP4P48539 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
PCP4P48539 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PCP4P48539 AL121772.1-201ENST00000618303 2335 ntTSL 2 BASIC8.79□□□□□ -1
PCP4P48539 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC8.78□□□□□ -1
PCP4P48539 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 OPRM1-208ENST00000434900 2033 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 AC009779.3-202ENST00000550412 3382 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
PCP4P48539 GABRA1-219ENST00000638112 2818 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
PCP4P48539 TNIK-203ENST00000357327 3996 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 GJB2-202ENST00000382848 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 UTP4-202ENST00000352319 1841 ntTSL 5 BASIC8.78□□□□□ -1
PCP4P48539 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 RBM3-203ENST00000376759 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 ZNF623-202ENST00000501748 6759 ntAPPRIS P3 BASIC8.78□□□□□ -1
PCP4P48539 NMUR2-201ENST00000255262 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
PCP4P48539 SETP4-201ENST00000455717 868 ntBASIC8.78□□□□□ -1
PCP4P48539 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 CTBP2P4-201ENST00000513884 920 ntBASIC8.78□□□□□ -1
PCP4P48539 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
PCP4P48539 BRWD1-AS2-201ENST00000603064 1028 ntBASIC8.78□□□□□ -1
PCP4P48539 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
PCP4P48539 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 ZNF859P-201ENST00000502859 1966 ntBASIC8.78□□□□□ -1
PCP4P48539 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
PCP4P48539 THRIL-201ENST00000627370 1977 ntBASIC8.78□□□□□ -1
PCP4P48539 POLR1E-201ENST00000377792 2229 ntTSL 2 BASIC8.78□□□□□ -1
PCP4P48539 IGBP1-201ENST00000342206 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
PCP4P48539 DCAF5-202ENST00000389997 2837 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 LINC01959-201ENST00000508452 2141 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC8.78□□□□□ -1
PCP4P48539 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 IPO7P2-201ENST00000451446 1750 ntBASIC8.78□□□□□ -1
PCP4P48539 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 ZNF608-201ENST00000306315 5958 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 AC023509.2-201ENST00000548347 2297 ntTSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 AKAP1-206ENST00000571629 3105 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
PCP4P48539 GOT1-201ENST00000370508 1947 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
PCP4P48539 RFLNB-201ENST00000329099 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
PCP4P48539 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
PCP4P48539 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
PCP4P48539 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC8.77□□□□□ -1
PCP4P48539 KRT89P-201ENST00000620027 1478 ntBASIC8.77□□□□□ -1
PCP4P48539 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
PCP4P48539 AC005837.1-201ENST00000565271 1717 ntBASIC8.77□□□□□ -1
PCP4P48539 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC8.77□□□□□ -1
PCP4P48539 PAX4-208ENST00000639438 2206 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
PCP4P48539 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC8.77□□□□□ -1.01
PCP4P48539 AC136944.2-201ENST00000568752 3971 ntBASIC8.77□□□□□ -1.01
PCP4P48539 DNASE1-201ENST00000246949 4200 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PCP4P48539 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC8.77□□□□□ -1.01
PCP4P48539 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC8.77□□□□□ -1.01
PCP4P48539 FAM238C-203ENST00000640121 3620 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PCP4P48539 MTR-205ENST00000535889 10405 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PCP4P48539 TARID-209ENST00000630119 4294 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PCP4P48539 C14orf132-203ENST00000555004 7583 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PCP4P48539 RBM23-215ENST00000555209 2278 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PCP4P48539 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
PCP4P48539 C11orf57-202ENST00000393047 3669 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
PCP4P48539 MRPL22-207ENST00000523037 3176 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
PCP4P48539 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC8.77□□□□□ -1.01
PCP4P48539 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC8.77□□□□□ -1.01
PCP4P48539 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PCP4P48539 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms