RNA–Protein interactions for RNA: ENST00000226951.10

CLNK-201, Transcript of cytokine dependent hematopoietic cell linker, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLNK, Length 5,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNK-201ENST00000226951 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
CLNK-201ENST00000226951 NISCHQ9Y2I1 1504 aa15.89■□□□□ 0.13
CLNK-201ENST00000226951 MYT1Q01538 1121 aa15.85■□□□□ 0.13
CLNK-201ENST00000226951 DCAF8L2P0C7V8 631 aa15.63■□□□□ 0.09
CLNK-201ENST00000226951 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
CLNK-201ENST00000226951 ZEB1P37275 1124 aaPredicted RBP15.42■□□□□ 0.06
CLNK-201ENST00000226951 CENPBP07199 599 aaPredicted RBP15.36■□□□□ 0.05
CLNK-201ENST00000226951 SHROOM4Q9ULL8 1493 aa15.24■□□□□ 0.03
CLNK-201ENST00000226951 PCGF6Q9BYE7 350 aa15.24■□□□□ 0.03
CLNK-201ENST00000226951 ERICH6Q7L0X2 663 aa15.12■□□□□ 0.01
CLNK-201ENST00000226951 CCER1Q8TC90 406 aaPredicted RBP15.11■□□□□ 0.01
CLNK-201ENST00000226951 HRCP23327 699 aa15□□□□□ -0.01
CLNK-201ENST00000226951 APLP2Q06481 763 aa14.93□□□□□ -0.02
CLNK-201ENST00000226951 EHMT2Q96KQ7 1210 aa14.84□□□□□ -0.03
CLNK-201ENST00000226951 TRIM26Q12899 539 aaPredicted RBP14.77□□□□□ -0.04
CLNK-201ENST00000226951 NEFLP07196 543 aa14.75□□□□□ -0.05
CLNK-201ENST00000226951 YTHDC1Q96MU7 727 aaKnown RBP14.64□□□□□ -0.07
CLNK-201ENST00000226951 FAM9AQ8IZU1 332 aaPredicted RBP14.62□□□□□ -0.07
CLNK-201ENST00000226951 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
CLNK-201ENST00000226951 TTBK1Q5TCY1 1321 aaPredicted RBP14.51□□□□□ -0.09
CLNK-201ENST00000226951 PPARGC1BQ86YN6 1023 aaKnown RBP14.39□□□□□ -0.11
CLNK-201ENST00000226951 DIEXFQ68CQ4 756 aaKnown RBP14.31□□□□□ -0.12
CLNK-201ENST00000226951 CHIC1Q5VXU3 224 aa14.27□□□□□ -0.13
CLNK-201ENST00000226951 UBTFP17480 764 aaKnown RBP14.25□□□□□ -0.13
CLNK-201ENST00000226951 DAXXQ9UER7 740 aaPredicted RBP14.25□□□□□ -0.13
CLNK-201ENST00000226951 GTF3C3Q9Y5Q9 886 aa14.24□□□□□ -0.13
CLNK-201ENST00000226951 RTL5Q5HYW3 569 aaPredicted RBP14.21□□□□□ -0.13
CLNK-201ENST00000226951 ACIN1Q9UKV3 1341 aaKnown RBP14.18□□□□□ -0.14
CLNK-201ENST00000226951 CLSPNQ9HAW4 1339 aa14.14□□□□□ -0.15
CLNK-201ENST00000226951 LOC105371045A0A1W2PR82 267 aa14.1□□□□□ -0.15
CLNK-201ENST00000226951 RANGAP1P46060 587 aaPredicted RBP14.08□□□□□ -0.16
CLNK-201ENST00000226951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.17
CLNK-201ENST00000226951 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
CLNK-201ENST00000226951 ZNF316A6NFI3 1004 aaPredicted RBP13.98□□□□□ -0.17
CLNK-201ENST00000226951 MYT1LQ9UL68 1186 aa13.98□□□□□ -0.17
CLNK-201ENST00000226951 CDK11AQ9UQ88 783 aaPredicted RBP13.98□□□□□ -0.17
CLNK-201ENST00000226951 ATP1B4Q9UN42 357 aaPredicted RBP13.96□□□□□ -0.17
CLNK-201ENST00000226951 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
CLNK-201ENST00000226951 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
CLNK-201ENST00000226951 BCANQ96GW7 911 aa13.82□□□□□ -0.2
CLNK-201ENST00000226951 ANP32CO43423 234 aa13.79□□□□□ -0.2
CLNK-201ENST00000226951 ANP32AP39687 249 aaKnown RBP13.75□□□□□ -0.21
CLNK-201ENST00000226951 CCDC180Q9P1Z9 1646 aa13.75□□□□□ -0.21
CLNK-201ENST00000226951 ITGAEP38570 1179 aa13.74□□□□□ -0.21
CLNK-201ENST00000226951 GLIPR1L2Q4G1C9 344 aa13.72□□□□□ -0.21
CLNK-201ENST00000226951 NEUROD1Q13562 356 aa13.69□□□□□ -0.22
CLNK-201ENST00000226951 POLR3GLQ9BT43 218 aa13.68□□□□□ -0.22
CLNK-201ENST00000226951 ANP32EQ9BTT0 268 aa13.61□□□□□ -0.23
CLNK-201ENST00000226951 FKBP8Q14318 412 aa13.58□□□□□ -0.23
CLNK-201ENST00000226951 EIF5BO60841 1220 aaKnown RBP13.52□□□□□ -0.25
CLNK-201ENST00000226951 FAM50AQ14320 339 aaKnown RBP13.51□□□□□ -0.25
CLNK-201ENST00000226951 CNGB1Q14028 1251 aaPredicted RBP13.44□□□□□ -0.26
CLNK-201ENST00000226951 ZBTB47Q9UFB7 747 aaPredicted RBP13.43□□□□□ -0.26
CLNK-201ENST00000226951 ANP32BQ92688 251 aaKnown RBP13.42□□□□□ -0.26
CLNK-201ENST00000226951 NPM2Q86SE8 214 aaKnown RBP13.41□□□□□ -0.26
CLNK-201ENST00000226951 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
CLNK-201ENST00000226951 MYO15BQ96JP2 1530 aa13.38□□□□□ -0.27
CLNK-201ENST00000226951 NBR1Q14596 966 aa13.37□□□□□ -0.27
CLNK-201ENST00000226951 MIER1Q8N108 512 aa13.36□□□□□ -0.27
CLNK-201ENST00000226951 BCL11AQ9H165 835 aa13.35□□□□□ -0.27
CLNK-201ENST00000226951 CANXP27824 592 aaKnown RBP13.33□□□□□ -0.28
CLNK-201ENST00000226951 DDRGK1Q96HY6 314 aa13.32□□□□□ -0.28
CLNK-201ENST00000226951 ZCCHC6Q5VYS8 1495 aaKnown RBP13.32□□□□□ -0.28
CLNK-201ENST00000226951 HNRNPUQ00839 825 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLNK-201ENST00000226951 UPF2Q9HAU5 1272 aaKnown RBP13.28□□□□□ -0.28
CLNK-201ENST00000226951 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
CLNK-201ENST00000226951 TONSLQ96HA7 1378 aa13.27□□□□□ -0.29
CLNK-201ENST00000226951 CCDC136Q96JN2 1154 aa13.26□□□□□ -0.29
CLNK-201ENST00000226951 SLC4A1APQ9BWU0 796 aaKnown RBP13.23□□□□□ -0.29
CLNK-201ENST00000226951 DDX10Q13206 875 aaKnown RBP13.22□□□□□ -0.29
CLNK-201ENST00000226951 SUPT16HQ9Y5B9 1047 aaKnown RBP13.22□□□□□ -0.29
CLNK-201ENST00000226951 PPM1GO15355 546 aaPredicted RBP13.2□□□□□ -0.3
CLNK-201ENST00000226951 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.18□□□□□ -0.3
CLNK-201ENST00000226951 ZNF326Q5BKZ1 582 aaKnown RBP13.16□□□□□ -0.3
CLNK-201ENST00000226951 NOP58Q9Y2X3 529 aaKnown RBP13.16□□□□□ -0.3
CLNK-201ENST00000226951 FAM9BQ8IZU0 186 aa13.15□□□□□ -0.3
CLNK-201ENST00000226951 ERICH6BQ5W0A0 696 aa13.14□□□□□ -0.31
CLNK-201ENST00000226951 HSP90AA1P07900 732 aaKnown RBP13.13□□□□□ -0.31
CLNK-201ENST00000226951 BECN1Q14457 450 aa13.13□□□□□ -0.31
CLNK-201ENST00000226951 PPP4R2Q9NY27 417 aa13.1□□□□□ -0.31
CLNK-201ENST00000226951 EEA1Q15075 1411 aa13.1□□□□□ -0.31
CLNK-201ENST00000226951 TNNT2P45379 298 aaPredicted RBP13.09□□□□□ -0.31
CLNK-201ENST00000226951 NEFMP07197 916 aa13.09□□□□□ -0.31
CLNK-201ENST00000226951 DEKP35659 375 aaKnown RBP13.08□□□□□ -0.32
CLNK-201ENST00000226951 TRIM44Q96DX7 344 aaPredicted RBP13.07□□□□□ -0.32
CLNK-201ENST00000226951 GOLGA3Q08378 1498 aa13.07□□□□□ -0.32
CLNK-201ENST00000226951 MRS2Q9HD23 443 aa13.06□□□□□ -0.32
CLNK-201ENST00000226951 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
CLNK-201ENST00000226951 IRX6P78412 446 aaPredicted RBP13.05□□□□□ -0.32
CLNK-201ENST00000226951 CEP162Q5TB80 1403 aa13.04□□□□□ -0.32
CLNK-201ENST00000226951 TMC1Q8TDI8 760 aa13.03□□□□□ -0.32
CLNK-201ENST00000226951 RBM19Q9Y4C8 960 aaKnown RBP13.01□□□□□ -0.33
CLNK-201ENST00000226951 CLIP1P30622 1438 aa13.01□□□□□ -0.33
CLNK-201ENST00000226951 NAP1L5Q96NT1 182 aaPredicted RBP12.99□□□□□ -0.33
CLNK-201ENST00000226951 L1TD1Q5T7N2 865 aaKnown RBP12.97□□□□□ -0.33
CLNK-201ENST00000226951 TNIKQ9UKE5 1360 aa12.97□□□□□ -0.33
CLNK-201ENST00000226951 GOLGA6L22H0YM25 854 aa12.97□□□□□ -0.33
CLNK-201ENST00000226951 CCER2I3L3R5 266 aa12.96□□□□□ -0.33
CLNK-201ENST00000226951 TSHZ2Q9NRE2 1034 aa12.95□□□□□ -0.34
CLNK-201ENST00000226951 EIF4G2P78344 907 aaKnown RBP eCLIP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 250.4 ms