RNA–Protein interactions for RNA: ENST00000246949.9

DNASE1-201, Transcript of deoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNASE1, Length 4,200 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNASE1-201ENST00000246949 NISCHQ9Y2I1 1504 aa18.99■□□□□ 0.63
DNASE1-201ENST00000246949 DCAF8L2P0C7V8 631 aa17.8■□□□□ 0.44
DNASE1-201ENST00000246949 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
DNASE1-201ENST00000246949 SUPT5HO00267 1087 aaKnown RBP16.7■□□□□ 0.26
DNASE1-201ENST00000246949 ABCC9O60706 1549 aa16.23■□□□□ 0.19
DNASE1-201ENST00000246949 PELP1Q8IZL8 1130 aaKnown RBP16.21■□□□□ 0.19
DNASE1-201ENST00000246949 HRCP23327 699 aa16.05■□□□□ 0.16
DNASE1-201ENST00000246949 CCDC180Q9P1Z9 1646 aa15.95■□□□□ 0.14
DNASE1-201ENST00000246949 MYT1Q01538 1121 aa15.78■□□□□ 0.12
DNASE1-201ENST00000246949 PABPN1Q86U42 306 aaKnown RBP eCLIP15.78■□□□□ 0.12
DNASE1-201ENST00000246949 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
DNASE1-201ENST00000246949 EHMT2Q96KQ7 1210 aa15.72■□□□□ 0.11
DNASE1-201ENST00000246949 FAM9AQ8IZU1 332 aaPredicted RBP15.61■□□□□ 0.09
DNASE1-201ENST00000246949 PCGF6Q9BYE7 350 aa15.58■□□□□ 0.09
DNASE1-201ENST00000246949 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
DNASE1-201ENST00000246949 PPARGC1BQ86YN6 1023 aaKnown RBP15.55■□□□□ 0.08
DNASE1-201ENST00000246949 SCRIBQ14160 1630 aa15.46■□□□□ 0.07
DNASE1-201ENST00000246949 RB1CC1Q8TDY2 1594 aa15.34■□□□□ 0.05
DNASE1-201ENST00000246949 NACADO15069 1562 aa15.32■□□□□ 0.04
DNASE1-201ENST00000246949 CHIC1Q5VXU3 224 aa15.29■□□□□ 0.04
DNASE1-201ENST00000246949 DCAF1Q9Y4B6 1507 aa15.26■□□□□ 0.03
DNASE1-201ENST00000246949 SCAF1Q9H7N4 1312 aaKnown RBP15.24■□□□□ 0.03
DNASE1-201ENST00000246949 ZEB1P37275 1124 aaPredicted RBP15.21■□□□□ 0.03
DNASE1-201ENST00000246949 RANGAP1P46060 587 aaPredicted RBP15.21■□□□□ 0.03
DNASE1-201ENST00000246949 UBTFP17480 764 aaKnown RBP15.17■□□□□ 0.02
DNASE1-201ENST00000246949 APLP2Q06481 763 aa15.16■□□□□ 0.02
DNASE1-201ENST00000246949 TRIM26Q12899 539 aaPredicted RBP15.07■□□□□ 0
DNASE1-201ENST00000246949 TTBK1Q5TCY1 1321 aaPredicted RBP15.06■□□□□ 0
DNASE1-201ENST00000246949 MYO15BQ96JP2 1530 aa15.04■□□□□ -0
DNASE1-201ENST00000246949 LOC105371045A0A1W2PR82 267 aa15.04■□□□□ -0
DNASE1-201ENST00000246949 RSF1Q96T23 1441 aaPredicted RBP14.99□□□□□ -0.01
DNASE1-201ENST00000246949 ATP1B4Q9UN42 357 aaPredicted RBP14.95□□□□□ -0.02
DNASE1-201ENST00000246949 ACIN1Q9UKV3 1341 aaKnown RBP14.92□□□□□ -0.02
DNASE1-201ENST00000246949 CECR2Q9BXF3 1484 aa14.91□□□□□ -0.02
DNASE1-201ENST00000246949 CENPBP07199 599 aaPredicted RBP14.9□□□□□ -0.02
DNASE1-201ENST00000246949 AEBP2Q6ZN18 517 aaPredicted RBP14.87□□□□□ -0.03
DNASE1-201ENST00000246949 GTF3C3Q9Y5Q9 886 aa14.8□□□□□ -0.04
DNASE1-201ENST00000246949 BAZ1AQ9NRL2 1556 aaPredicted RBP14.79□□□□□ -0.04
DNASE1-201ENST00000246949 NEUROD1Q13562 356 aa14.77□□□□□ -0.05
DNASE1-201ENST00000246949 BAZ1BQ9UIG0 1483 aaKnown RBP14.72□□□□□ -0.05
DNASE1-201ENST00000246949 MROH2BQ7Z745 1585 aa14.71□□□□□ -0.05
DNASE1-201ENST00000246949 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
DNASE1-201ENST00000246949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.59□□□□□ -0.07
DNASE1-201ENST00000246949 HNRNPUL2Q1KMD3 747 aaKnown RBP14.59□□□□□ -0.07
DNASE1-201ENST00000246949 FBLN2P98095 1184 aa14.59□□□□□ -0.07
DNASE1-201ENST00000246949 DIEXFQ68CQ4 756 aaKnown RBP14.54□□□□□ -0.08
DNASE1-201ENST00000246949 CCER1Q8TC90 406 aaPredicted RBP14.53□□□□□ -0.08
DNASE1-201ENST00000246949 SMARCA2P51531 1590 aa14.49□□□□□ -0.09
DNASE1-201ENST00000246949 CCDC88BA6NC98 1476 aa14.48□□□□□ -0.09
DNASE1-201ENST00000246949 WIZO95785 1651 aa14.48□□□□□ -0.09
DNASE1-201ENST00000246949 ITGAEP38570 1179 aa14.47□□□□□ -0.09
DNASE1-201ENST00000246949 WRNQ14191 1432 aaPredicted RBP eCLIP14.46□□□□□ -0.09
DNASE1-201ENST00000246949 ATAD2BQ9ULI0 1458 aa14.45□□□□□ -0.1
DNASE1-201ENST00000246949 P3H3Q8IVL6 736 aa14.44□□□□□ -0.1
DNASE1-201ENST00000246949 SMARCA4P51532 1647 aa14.42□□□□□ -0.1
DNASE1-201ENST00000246949 BCL11AQ9H165 835 aa14.39□□□□□ -0.11
DNASE1-201ENST00000246949 TOP2AP11388 1531 aaKnown RBP14.38□□□□□ -0.11
DNASE1-201ENST00000246949 YTHDC1Q96MU7 727 aaKnown RBP14.33□□□□□ -0.12
DNASE1-201ENST00000246949 ARID3CA6NKF2 412 aa14.29□□□□□ -0.12
DNASE1-201ENST00000246949 EEA1Q15075 1411 aa14.28□□□□□ -0.12
DNASE1-201ENST00000246949 ERCC6Q03468 1493 aa14.27□□□□□ -0.12
DNASE1-201ENST00000246949 CADPSQ9ULU8 1353 aa14.27□□□□□ -0.12
DNASE1-201ENST00000246949 ANP32EQ9BTT0 268 aa14.27□□□□□ -0.12
DNASE1-201ENST00000246949 FAM50AQ14320 339 aaKnown RBP14.26□□□□□ -0.13
DNASE1-201ENST00000246949 MYT1LQ9UL68 1186 aa14.26□□□□□ -0.13
DNASE1-201ENST00000246949 EIF4G1Q04637 1599 aaKnown RBP14.25□□□□□ -0.13
DNASE1-201ENST00000246949 CHMP7Q8WUX9 453 aaPredicted RBP14.25□□□□□ -0.13
DNASE1-201ENST00000246949 KIF27Q86VH2 1401 aa14.25□□□□□ -0.13
DNASE1-201ENST00000246949 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
DNASE1-201ENST00000246949 BICRAQ9NZM4 1560 aa14.22□□□□□ -0.13
DNASE1-201ENST00000246949 NCAPD3P42695 1498 aa14.22□□□□□ -0.13
DNASE1-201ENST00000246949 PDS5BQ9NTI5 1447 aa14.22□□□□□ -0.13
DNASE1-201ENST00000246949 SOGA1O94964 1423 aa14.21□□□□□ -0.13
DNASE1-201ENST00000246949 ZNF316A6NFI3 1004 aaPredicted RBP14.2□□□□□ -0.14
DNASE1-201ENST00000246949 CLSPNQ9HAW4 1339 aa14.19□□□□□ -0.14
DNASE1-201ENST00000246949 GOLGA3Q08378 1498 aa14.16□□□□□ -0.14
DNASE1-201ENST00000246949 CLIP1P30622 1438 aa14.15□□□□□ -0.14
DNASE1-201ENST00000246949 CUX2O14529 1486 aa14.15□□□□□ -0.14
DNASE1-201ENST00000246949 CEP164Q9UPV0 1460 aa14.11□□□□□ -0.15
DNASE1-201ENST00000246949 CDK11AQ9UQ88 783 aaPredicted RBP14.1□□□□□ -0.15
DNASE1-201ENST00000246949 CEP162Q5TB80 1403 aa14.1□□□□□ -0.15
DNASE1-201ENST00000246949 TNIKQ9UKE5 1360 aa14.09□□□□□ -0.15
DNASE1-201ENST00000246949 TDRD9Q8NDG6 1382 aaKnown RBP14.08□□□□□ -0.15
DNASE1-201ENST00000246949 CARMIL1Q5VZK9 1371 aa14.08□□□□□ -0.16
DNASE1-201ENST00000246949 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
DNASE1-201ENST00000246949 MIER1Q8N108 512 aa14.04□□□□□ -0.16
DNASE1-201ENST00000246949 CC2D2AQ9P2K1 1620 aa14.04□□□□□ -0.16
DNASE1-201ENST00000246949 TRIM52Q96A61 297 aa14.03□□□□□ -0.16
DNASE1-201ENST00000246949 ZNF777Q9ULD5 760 aaPredicted RBP14.02□□□□□ -0.16
DNASE1-201ENST00000246949 ERICH6Q7L0X2 663 aa14.01□□□□□ -0.17
DNASE1-201ENST00000246949 UNC13AQ9UPW8 1703 aa14□□□□□ -0.17
DNASE1-201ENST00000246949 DNAJC5BQ9UF47 199 aa14□□□□□ -0.17
DNASE1-201ENST00000246949 TSHZ2Q9NRE2 1034 aa13.98□□□□□ -0.17
DNASE1-201ENST00000246949 SUPT16HQ9Y5B9 1047 aaKnown RBP13.98□□□□□ -0.17
DNASE1-201ENST00000246949 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
DNASE1-201ENST00000246949 HMGXB3Q12766 1538 aa13.96□□□□□ -0.17
DNASE1-201ENST00000246949 PRKCSHP14314 528 aaPredicted RBP13.95□□□□□ -0.18
DNASE1-201ENST00000246949 MTUS2Q5JR59 1369 aa13.95□□□□□ -0.18
DNASE1-201ENST00000246949 RUSC2Q8N2Y8 1516 aa13.94□□□□□ -0.18
DNASE1-201ENST00000246949 CFTRP13569 1480 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms