Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LCN1P31025 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LCN1P31025 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
LCN1P31025 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LCN1P31025 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.9□□□□□ -0.34
LCN1P31025 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.9□□□□□ -0.34
LCN1P31025 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.9□□□□□ -0.34
LCN1P31025 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.9□□□□□ -0.34
LCN1P31025 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.9□□□□□ -0.34
LCN1P31025 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.9□□□□□ -0.34
LCN1P31025 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LCN1P31025 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
LCN1P31025 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.9□□□□□ -0.34
LCN1P31025 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.9□□□□□ -0.34
LCN1P31025 AC012618.1-201ENST00000461223 412 ntBASIC12.9□□□□□ -0.34
LCN1P31025 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.9□□□□□ -0.34
LCN1P31025 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.9□□□□□ -0.34
LCN1P31025 AC020922.3-201ENST00000595064 547 ntBASIC12.9□□□□□ -0.34
LCN1P31025 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.9□□□□□ -0.34
LCN1P31025 AL356740.1-201ENST00000602192 1297 ntBASIC12.9□□□□□ -0.34
LCN1P31025 AP001505.2-201ENST00000616815 443 ntBASIC12.9□□□□□ -0.34
LCN1P31025 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
LCN1P31025 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 FP325330.2-201ENST00000624219 5630 ntBASIC12.9□□□□□ -0.34
LCN1P31025 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 AL359845.1-201ENST00000458202 1648 ntBASIC12.9□□□□□ -0.34
LCN1P31025 AC020917.4-201ENST00000623994 1999 ntBASIC12.9□□□□□ -0.34
LCN1P31025 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.9□□□□□ -0.34
LCN1P31025 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.9□□□□□ -0.34
LCN1P31025 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.9□□□□□ -0.34
LCN1P31025 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
LCN1P31025 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.9□□□□□ -0.34
LCN1P31025 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.9□□□□□ -0.34
LCN1P31025 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LCN1P31025 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.9□□□□□ -0.34
LCN1P31025 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.35
LCN1P31025 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LCN1P31025 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 TEKT4P2-202ENST00000559466 1312 ntBASIC12.89□□□□□ -0.35
LCN1P31025 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.89□□□□□ -0.35
LCN1P31025 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LCN1P31025 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
LCN1P31025 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LCN1P31025 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.89□□□□□ -0.35
LCN1P31025 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.89□□□□□ -0.35
LCN1P31025 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
LCN1P31025 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LCN1P31025 AL133466.1-201ENST00000447582 150 ntBASIC12.89□□□□□ -0.35
LCN1P31025 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.89□□□□□ -0.35
LCN1P31025 AC242376.1-201ENST00000559033 726 ntBASIC12.89□□□□□ -0.35
LCN1P31025 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.89□□□□□ -0.35
LCN1P31025 AL109837.1-201ENST00000603272 613 ntBASIC12.89□□□□□ -0.35
LCN1P31025 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.89□□□□□ -0.35
LCN1P31025 AC009560.1-201ENST00000620208 434 ntBASIC12.89□□□□□ -0.35
LCN1P31025 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.89□□□□□ -0.35
LCN1P31025 AC138627.1-207ENST00000641560 1006 ntBASIC12.89□□□□□ -0.35
LCN1P31025 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.89□□□□□ -0.35
LCN1P31025 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.89□□□□□ -0.35
LCN1P31025 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LCN1P31025 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LCN1P31025 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.89□□□□□ -0.35
LCN1P31025 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.89□□□□□ -0.35
LCN1P31025 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms