Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ERCC2P18074 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.25□□□□□ -0.13
ERCC2P18074 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
ERCC2P18074 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC2P18074 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.25□□□□□ -0.13
ERCC2P18074 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
ERCC2P18074 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.25□□□□□ -0.13
ERCC2P18074 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC2P18074 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ERCC2P18074 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.25□□□□□ -0.13
ERCC2P18074 GGTLC4P-201ENST00000402176 664 ntBASIC14.25□□□□□ -0.13
ERCC2P18074 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.25□□□□□ -0.13
ERCC2P18074 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.25□□□□□ -0.13
ERCC2P18074 AL627422.1-201ENST00000434104 580 ntBASIC14.25□□□□□ -0.13
ERCC2P18074 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.25□□□□□ -0.13
ERCC2P18074 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.25□□□□□ -0.13
ERCC2P18074 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 RN7SL81P-201ENST00000493781 261 ntBASIC14.25□□□□□ -0.13
ERCC2P18074 ORAOV1P1-201ENST00000503108 395 ntBASIC14.25□□□□□ -0.13
ERCC2P18074 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.25□□□□□ -0.13
ERCC2P18074 AC105129.2-201ENST00000559536 390 ntBASIC14.25□□□□□ -0.13
ERCC2P18074 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.25□□□□□ -0.13
ERCC2P18074 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.25□□□□□ -0.13
ERCC2P18074 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.25□□□□□ -0.13
ERCC2P18074 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC2P18074 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
ERCC2P18074 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.25□□□□□ -0.13
ERCC2P18074 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.25□□□□□ -0.13
ERCC2P18074 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.25□□□□□ -0.13
ERCC2P18074 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.25□□□□□ -0.13
ERCC2P18074 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.25□□□□□ -0.13
ERCC2P18074 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC2P18074 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 PPP1R26P2-201ENST00000611403 3595 ntBASIC14.25□□□□□ -0.13
ERCC2P18074 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.25□□□□□ -0.13
ERCC2P18074 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC2P18074 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.25□□□□□ -0.13
ERCC2P18074 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC2P18074 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC2P18074 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC2P18074 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERCC2P18074 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.25□□□□□ -0.13
ERCC2P18074 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC2P18074 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC2P18074 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
ERCC2P18074 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.24□□□□□ -0.13
ERCC2P18074 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC2P18074 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC2P18074 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC2P18074 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC2P18074 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
ERCC2P18074 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
ERCC2P18074 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC2P18074 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ERCC2P18074 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.24□□□□□ -0.13
ERCC2P18074 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC2P18074 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC2P18074 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC2P18074 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.24□□□□□ -0.13
ERCC2P18074 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
ERCC2P18074 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.24□□□□□ -0.13
ERCC2P18074 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.24□□□□□ -0.13
ERCC2P18074 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC2P18074 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ERCC2P18074 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
ERCC2P18074 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.24□□□□□ -0.13
ERCC2P18074 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.24□□□□□ -0.13
ERCC2P18074 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.24□□□□□ -0.13
ERCC2P18074 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.24□□□□□ -0.13
ERCC2P18074 MIR2392-201ENST00000584881 84 ntBASIC14.24□□□□□ -0.13
ERCC2P18074 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.24□□□□□ -0.13
ERCC2P18074 AC005632.3-201ENST00000605544 308 ntBASIC14.24□□□□□ -0.13
ERCC2P18074 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC2P18074 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
ERCC2P18074 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC2P18074 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ERCC2P18074 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ERCC2P18074 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.24□□□□□ -0.13
ERCC2P18074 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.24□□□□□ -0.13
ERCC2P18074 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms