Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN2P17655 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN2P17655 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN2P17655 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.08■□□□□ 0.16
CAPN2P17655 KRT18P4-201ENST00000422599 1288 ntBASIC16.08■□□□□ 0.16
CAPN2P17655 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.08■□□□□ 0.16
CAPN2P17655 CHCHD2P2-201ENST00000503744 321 ntBASIC16.08■□□□□ 0.16
CAPN2P17655 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.08■□□□□ 0.16
CAPN2P17655 IGHEP1-201ENST00000521393 651 ntBASIC16.08■□□□□ 0.16
CAPN2P17655 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.08■□□□□ 0.16
CAPN2P17655 AC092862.1-201ENST00000541534 533 ntBASIC16.08■□□□□ 0.16
CAPN2P17655 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC16.08■□□□□ 0.16
CAPN2P17655 NDUFB10P1-201ENST00000567319 521 ntBASIC16.08■□□□□ 0.16
CAPN2P17655 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.08■□□□□ 0.16
CAPN2P17655 GAS7-216ENST00000583882 553 ntTSL 5 BASIC16.08■□□□□ 0.16
CAPN2P17655 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.08■□□□□ 0.16
CAPN2P17655 AC008972.2-201ENST00000606587 494 ntBASIC16.08■□□□□ 0.16
CAPN2P17655 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN2P17655 AC011462.4-201ENST00000616866 449 ntBASIC16.08■□□□□ 0.16
CAPN2P17655 AC090386.2-201ENST00000623010 1039 ntBASIC16.08■□□□□ 0.16
CAPN2P17655 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.08■□□□□ 0.16
CAPN2P17655 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.08■□□□□ 0.16
CAPN2P17655 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.08■□□□□ 0.16
CAPN2P17655 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN2P17655 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN2P17655 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN2P17655 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN2P17655 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN2P17655 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC16.08■□□□□ 0.16
CAPN2P17655 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
CAPN2P17655 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.08■□□□□ 0.16
CAPN2P17655 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CAPN2P17655 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN2P17655 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CAPN2P17655 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN2P17655 TET3-201ENST00000305799 5174 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN2P17655 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.07■□□□□ 0.16
CAPN2P17655 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CAPN2P17655 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CAPN2P17655 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN2P17655 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.07■□□□□ 0.16
CAPN2P17655 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN2P17655 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CAPN2P17655 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN2P17655 PSAT1P2-201ENST00000426107 972 ntBASIC16.07■□□□□ 0.16
CAPN2P17655 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN2P17655 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC16.07■□□□□ 0.16
CAPN2P17655 BCL2L12P1-201ENST00000508390 733 ntBASIC16.07■□□□□ 0.16
CAPN2P17655 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
CAPN2P17655 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN2P17655 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.07■□□□□ 0.16
CAPN2P17655 AC004801.1-201ENST00000549557 360 ntBASIC16.07■□□□□ 0.16
CAPN2P17655 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 AC013553.1-201ENST00000560906 267 ntBASIC16.07■□□□□ 0.16
CAPN2P17655 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CAPN2P17655 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN2P17655 AP005264.5-201ENST00000590066 467 ntBASIC16.07■□□□□ 0.16
CAPN2P17655 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN2P17655 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN2P17655 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.07■□□□□ 0.16
CAPN2P17655 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN2P17655 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.07■□□□□ 0.16
CAPN2P17655 AP002353.1-201ENST00000528257 1599 ntBASIC16.07■□□□□ 0.16
CAPN2P17655 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CAPN2P17655 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CAPN2P17655 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN2P17655 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CAPN2P17655 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CAPN2P17655 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CAPN2P17655 BEND3P3-201ENST00000611030 2440 ntBASIC16.06■□□□□ 0.16
CAPN2P17655 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CAPN2P17655 FTO-214ENST00000636218 2227 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN2P17655 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN2P17655 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CAPN2P17655 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms