Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COX4I1P13073 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.38□□□□□ -0.27
COX4I1P13073 AC009884.2-201ENST00000603110 324 ntBASIC13.38□□□□□ -0.27
COX4I1P13073 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
COX4I1P13073 AC133540.1-201ENST00000620845 1019 ntBASIC13.38□□□□□ -0.27
COX4I1P13073 AC138951.2-201ENST00000623455 1161 ntBASIC13.38□□□□□ -0.27
COX4I1P13073 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COX4I1P13073 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC13.38□□□□□ -0.27
COX4I1P13073 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.38□□□□□ -0.27
COX4I1P13073 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COX4I1P13073 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COX4I1P13073 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
COX4I1P13073 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COX4I1P13073 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COX4I1P13073 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COX4I1P13073 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC13.38□□□□□ -0.27
COX4I1P13073 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
COX4I1P13073 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
COX4I1P13073 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COX4I1P13073 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.38□□□□□ -0.27
COX4I1P13073 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
COX4I1P13073 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC13.37□□□□□ -0.27
COX4I1P13073 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.37□□□□□ -0.27
COX4I1P13073 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
COX4I1P13073 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
COX4I1P13073 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
COX4I1P13073 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
COX4I1P13073 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
COX4I1P13073 CTAGE13P-201ENST00000416709 2446 ntBASIC13.37□□□□□ -0.27
COX4I1P13073 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
COX4I1P13073 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
COX4I1P13073 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.37□□□□□ -0.27
COX4I1P13073 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 AC006122.1-201ENST00000493323 440 ntBASIC13.37□□□□□ -0.27
COX4I1P13073 RNA5SP421-201ENST00000516864 134 ntBASIC13.37□□□□□ -0.27
COX4I1P13073 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.37□□□□□ -0.27
COX4I1P13073 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 AC140912.1-201ENST00000577171 1054 ntBASIC13.37□□□□□ -0.27
COX4I1P13073 MIR4783-201ENST00000580343 82 ntBASIC13.37□□□□□ -0.27
COX4I1P13073 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.37□□□□□ -0.27
COX4I1P13073 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.37□□□□□ -0.27
COX4I1P13073 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
COX4I1P13073 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
COX4I1P13073 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC13.37□□□□□ -0.27
COX4I1P13073 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.37□□□□□ -0.27
COX4I1P13073 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC13.37□□□□□ -0.27
COX4I1P13073 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 CSPG4P11-201ENST00000560634 4910 ntBASIC13.37□□□□□ -0.27
COX4I1P13073 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 AC245140.2-201ENST00000624054 1939 ntBASIC13.37□□□□□ -0.27
COX4I1P13073 AHCYP4-201ENST00000419201 1315 ntBASIC13.37□□□□□ -0.27
COX4I1P13073 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COX4I1P13073 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.36□□□□□ -0.27
COX4I1P13073 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC13.36□□□□□ -0.27
COX4I1P13073 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.36□□□□□ -0.27
COX4I1P13073 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
COX4I1P13073 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC13.36□□□□□ -0.27
COX4I1P13073 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COX4I1P13073 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms