Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CD48P09326 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.35□□□□□ -0.11
CD48P09326 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.35□□□□□ -0.11
CD48P09326 RPL8P2-201ENST00000430538 502 ntBASIC14.35□□□□□ -0.11
CD48P09326 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.35□□□□□ -0.11
CD48P09326 AL353637.1-201ENST00000451571 732 ntBASIC14.35□□□□□ -0.11
CD48P09326 RN7SL67P-201ENST00000492147 296 ntBASIC14.35□□□□□ -0.11
CD48P09326 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.35□□□□□ -0.11
CD48P09326 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.35□□□□□ -0.11
CD48P09326 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.35□□□□□ -0.11
CD48P09326 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.35□□□□□ -0.11
CD48P09326 RN7SL665P-201ENST00000578793 300 ntBASIC14.35□□□□□ -0.11
CD48P09326 SIGLEC18P-201ENST00000602271 909 ntBASIC14.35□□□□□ -0.11
CD48P09326 MIR6787-201ENST00000616675 61 ntBASIC14.35□□□□□ -0.11
CD48P09326 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.35□□□□□ -0.11
CD48P09326 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.35□□□□□ -0.11
CD48P09326 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.35□□□□□ -0.11
CD48P09326 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.35□□□□□ -0.11
CD48P09326 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.35□□□□□ -0.11
CD48P09326 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.35□□□□□ -0.11
CD48P09326 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC14.35□□□□□ -0.11
CD48P09326 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.35□□□□□ -0.11
CD48P09326 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.35□□□□□ -0.11
CD48P09326 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD48P09326 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CD48P09326 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.34□□□□□ -0.11
CD48P09326 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC14.34□□□□□ -0.11
CD48P09326 AL031719.1-201ENST00000623365 2587 ntBASIC14.34□□□□□ -0.11
CD48P09326 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CD48P09326 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
CD48P09326 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.34□□□□□ -0.11
CD48P09326 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.34□□□□□ -0.11
CD48P09326 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CD48P09326 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CD48P09326 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CD48P09326 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CD48P09326 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 PI4KAP2-201ENST00000360806 2080 ntBASIC14.34□□□□□ -0.11
CD48P09326 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.34□□□□□ -0.11
CD48P09326 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.34□□□□□ -0.11
CD48P09326 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CD48P09326 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CD48P09326 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.34□□□□□ -0.11
CD48P09326 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 AL807761.2-201ENST00000422849 729 ntBASIC14.34□□□□□ -0.11
CD48P09326 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 AC244107.1-201ENST00000442033 332 ntBASIC14.34□□□□□ -0.11
CD48P09326 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.34□□□□□ -0.11
CD48P09326 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.34□□□□□ -0.11
CD48P09326 AP000358.1-201ENST00000456260 156 ntBASIC14.34□□□□□ -0.11
CD48P09326 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.34□□□□□ -0.11
CD48P09326 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.34□□□□□ -0.11
CD48P09326 MIR4265-201ENST00000582152 99 ntBASIC14.34□□□□□ -0.11
CD48P09326 MIR4326-201ENST00000582203 59 ntBASIC14.34□□□□□ -0.11
CD48P09326 AL049840.2-201ENST00000602722 535 ntBASIC14.34□□□□□ -0.11
CD48P09326 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.34□□□□□ -0.11
CD48P09326 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.34□□□□□ -0.11
CD48P09326 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.34□□□□□ -0.11
CD48P09326 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.34□□□□□ -0.11
CD48P09326 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CD48P09326 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CD48P09326 PDXDC2P-206ENST00000534700 1315 ntBASIC14.34□□□□□ -0.11
CD48P09326 AC008040.5-201ENST00000599781 1781 ntBASIC14.34□□□□□ -0.11
CD48P09326 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CD48P09326 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CD48P09326 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD48P09326 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CD48P09326 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms