Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 SNORA50C-201ENST00000408535 133 ntBASIC16.2■□□□□ 0.18
HLA-DOAP06340 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 HLA-DPA2-205ENST00000433582 733 ntBASIC16.2■□□□□ 0.18
HLA-DOAP06340 NRADDP-201ENST00000437305 691 ntBASIC16.2■□□□□ 0.18
HLA-DOAP06340 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 ALG1L7P-201ENST00000502317 768 ntBASIC16.2■□□□□ 0.18
HLA-DOAP06340 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 URAHP-205ENST00000610227 398 ntBASIC16.2■□□□□ 0.18
HLA-DOAP06340 AC137723.2-201ENST00000623540 398 ntBASIC16.2■□□□□ 0.18
HLA-DOAP06340 SNORA50.1-201ENST00000628590 135 ntBASIC16.2■□□□□ 0.18
HLA-DOAP06340 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DOAP06340 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DOAP06340 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 RNA5SP491-201ENST00000362936 118 ntBASIC16.19■□□□□ 0.18
HLA-DOAP06340 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 AC092810.2-201ENST00000431570 362 ntBASIC16.19■□□□□ 0.18
HLA-DOAP06340 AL451000.1-201ENST00000451300 1186 ntBASIC16.19■□□□□ 0.18
HLA-DOAP06340 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 AC078814.4-201ENST00000546650 327 ntBASIC16.19■□□□□ 0.18
HLA-DOAP06340 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 DNM1P51-201ENST00000558149 522 ntBASIC16.19■□□□□ 0.18
HLA-DOAP06340 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 APOC1-209ENST00000592885 562 ntTSL 3 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 AGAP10P-201ENST00000454844 2418 ntBASIC16.19■□□□□ 0.18
HLA-DOAP06340 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DOAP06340 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DOAP06340 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DOAP06340 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DOAP06340 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DOAP06340 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DOAP06340 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DOAP06340 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DOAP06340 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DOAP06340 AL031595.1-201ENST00000623969 4709 ntBASIC16.18■□□□□ 0.18
HLA-DOAP06340 AC024075.2-201ENST00000598112 1473 ntBASIC16.18■□□□□ 0.18
HLA-DOAP06340 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DOAP06340 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DOAP06340 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms