Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.43□□□□□ -0.42
CNOT4O95628 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.43□□□□□ -0.42
CNOT4O95628 AL591122.2-201ENST00000624125 1853 ntBASIC12.43□□□□□ -0.42
CNOT4O95628 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CNOT4O95628 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CNOT4O95628 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CNOT4O95628 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.43□□□□□ -0.42
CNOT4O95628 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.43□□□□□ -0.42
CNOT4O95628 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.43□□□□□ -0.42
CNOT4O95628 ORAOV1P1-201ENST00000503108 395 ntBASIC12.43□□□□□ -0.42
CNOT4O95628 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.43□□□□□ -0.42
CNOT4O95628 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.43□□□□□ -0.42
CNOT4O95628 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.43□□□□□ -0.42
CNOT4O95628 AP002803.1-201ENST00000528836 498 ntBASIC12.43□□□□□ -0.42
CNOT4O95628 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.43□□□□□ -0.42
CNOT4O95628 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 AC145285.5-201ENST00000562217 361 ntBASIC12.43□□□□□ -0.42
CNOT4O95628 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.43□□□□□ -0.42
CNOT4O95628 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.43□□□□□ -0.42
CNOT4O95628 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.43□□□□□ -0.42
CNOT4O95628 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.43□□□□□ -0.42
CNOT4O95628 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
CNOT4O95628 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CNOT4O95628 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CNOT4O95628 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CNOT4O95628 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CNOT4O95628 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CNOT4O95628 AC005252.3-201ENST00000623855 2258 ntBASIC12.42□□□□□ -0.42
CNOT4O95628 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.42□□□□□ -0.42
CNOT4O95628 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CNOT4O95628 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CNOT4O95628 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 AC067931.2-201ENST00000623655 2003 ntBASIC12.42□□□□□ -0.42
CNOT4O95628 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.42□□□□□ -0.42
CNOT4O95628 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.42□□□□□ -0.42
CNOT4O95628 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CNOT4O95628 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.42□□□□□ -0.42
CNOT4O95628 AK2P2-201ENST00000439142 405 ntBASIC12.42□□□□□ -0.42
CNOT4O95628 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.42□□□□□ -0.42
CNOT4O95628 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.42□□□□□ -0.42
CNOT4O95628 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.42□□□□□ -0.42
CNOT4O95628 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CNOT4O95628 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.42□□□□□ -0.42
CNOT4O95628 KRT18P8-201ENST00000581937 1246 ntBASIC12.42□□□□□ -0.42
CNOT4O95628 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.42□□□□□ -0.42
CNOT4O95628 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 AP001184.1-201ENST00000637936 376 ntBASIC12.42□□□□□ -0.42
CNOT4O95628 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.42□□□□□ -0.42
CNOT4O95628 CYP51A1P3-201ENST00000400072 1428 ntBASIC12.42□□□□□ -0.42
CNOT4O95628 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.42□□□□□ -0.42
CNOT4O95628 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.42□□□□□ -0.42
CNOT4O95628 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CNOT4O95628 AC025271.4-201ENST00000621477 1726 ntBASIC12.42□□□□□ -0.42
CNOT4O95628 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.42□□□□□ -0.42
CNOT4O95628 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.42□□□□□ -0.42
CNOT4O95628 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.42□□□□□ -0.42
CNOT4O95628 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.42□□□□□ -0.42
CNOT4O95628 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 AC118758.2-201ENST00000614242 2813 ntBASIC12.42□□□□□ -0.42
CNOT4O95628 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CNOT4O95628 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CNOT4O95628 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.41□□□□□ -0.42
CNOT4O95628 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.41□□□□□ -0.42
CNOT4O95628 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms