Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 AL583805.1-201ENST00000391389 531 ntBASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 EEF1DP2-201ENST00000433698 843 ntBASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 AP000358.1-201ENST00000456260 156 ntBASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 RN7SL67P-201ENST00000492147 296 ntBASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 PRKXP1-201ENST00000561423 1122 ntBASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 MIR4326-201ENST00000582203 59 ntBASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 SIGLEC18P-201ENST00000602271 909 ntBASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 AC007326.1-201ENST00000604539 458 ntBASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 AC009145.4-201ENST00000625119 1294 ntBASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 AC131212.3-201ENST00000624087 4219 ntBASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 AC026271.4-201ENST00000578214 1833 ntBASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 AL807761.2-201ENST00000422849 729 ntBASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 COQ10BP2-201ENST00000513804 724 ntBASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 IGLV3-15-201ENST00000518356 244 ntBASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 AC145285.5-201ENST00000562217 361 ntBASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 MIR4265-201ENST00000582152 99 ntBASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 AL049840.2-201ENST00000602722 535 ntBASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCDH19Q8TAB3 AC007718.1-201ENST00000621078 280 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms