Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BEST2Q8NFU1 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 AC021305.1-201ENST00000520656 1514 ntBASIC14.87□□□□□ -0.03
BEST2Q8NFU1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 AL355334.1-201ENST00000417713 215 ntBASIC14.87□□□□□ -0.03
BEST2Q8NFU1 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 AL118522.1-201ENST00000611368 560 ntBASIC14.87□□□□□ -0.03
BEST2Q8NFU1 AC009084.3-201ENST00000623356 437 ntBASIC14.87□□□□□ -0.03
BEST2Q8NFU1 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 AC245140.2-201ENST00000624054 1939 ntBASIC14.87□□□□□ -0.03
BEST2Q8NFU1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 AC020917.4-201ENST00000623994 1999 ntBASIC14.87□□□□□ -0.03
BEST2Q8NFU1 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC14.87□□□□□ -0.03
BEST2Q8NFU1 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 LINC00634-202ENST00000505157 222 ntBASIC14.86□□□□□ -0.03
BEST2Q8NFU1 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 MIR8071-1-201ENST00000616769 65 ntBASIC14.86□□□□□ -0.03
BEST2Q8NFU1 MIR8071-2-201ENST00000616772 65 ntBASIC14.86□□□□□ -0.03
BEST2Q8NFU1 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
BEST2Q8NFU1 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms