Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AC012066.1-201ENST00000439252 694 ntBASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 CHCHD2P6-201ENST00000454346 447 ntBASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AP001979.1-201ENST00000529222 751 ntBASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AC080038.2-201ENST00000617734 423 ntBASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 CLUHP8-201ENST00000547527 1485 ntBASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 TUBB8P9-201ENST00000422534 1276 ntBASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 TUBB8P10-201ENST00000430210 1279 ntBASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AC079331.1-201ENST00000623200 1200 ntBASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 HRC-203ENST00000595625 2044 ntTSL 5 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 FAM183BP-201ENST00000409072 1595 ntBASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AL356583.1-201ENST00000398739 1371 ntBASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 NLK-203ENST00000582037 1503 ntTSL 2 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 AL596257.1-201ENST00000641463 2694 ntBASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 NCLP1-201ENST00000445357 1963 ntBASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 RNF7-202ENST00000393000 805 ntTSL 2 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 GAPDHP76-201ENST00000512278 976 ntBASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 COPZ1-207ENST00000549116 736 ntTSL 2 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 RN7SL238P-201ENST00000613832 290 ntBASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 RN7SL106P-201ENST00000618104 290 ntBASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 NNMT-201ENST00000299964 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 OR7E122P-201ENST00000383606 1017 ntBASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 PTPA-219ENST00000435305 530 ntTSL 2 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 AL391822.1-201ENST00000452580 562 ntBASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 AC007274.3-201ENST00000619838 385 ntBASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC8.85□□□□□ -0.99
VPS13DQ5THJ4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms