Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.52□□□□□ -0.41
CDK5Q00535 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.52□□□□□ -0.41
CDK5Q00535 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.52□□□□□ -0.41
CDK5Q00535 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.52□□□□□ -0.41
CDK5Q00535 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.52□□□□□ -0.41
CDK5Q00535 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.52□□□□□ -0.41
CDK5Q00535 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.52□□□□□ -0.41
CDK5Q00535 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 AL023803.2-201ENST00000620080 638 ntBASIC12.52□□□□□ -0.41
CDK5Q00535 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CDK5Q00535 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CDK5Q00535 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.52□□□□□ -0.41
CDK5Q00535 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.52□□□□□ -0.41
CDK5Q00535 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC12.52□□□□□ -0.41
CDK5Q00535 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 AC067931.2-201ENST00000623655 2003 ntBASIC12.52□□□□□ -0.41
CDK5Q00535 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 AC015819.3-201ENST00000624305 2674 ntBASIC12.52□□□□□ -0.41
CDK5Q00535 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CDK5Q00535 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.52□□□□□ -0.41
CDK5Q00535 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CDK5Q00535 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.52□□□□□ -0.41
CDK5Q00535 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.51□□□□□ -0.41
CDK5Q00535 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CDK5Q00535 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
CDK5Q00535 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.51□□□□□ -0.41
CDK5Q00535 BOLA2P3-201ENST00000404566 256 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 TSPY25P-201ENST00000429463 745 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.51□□□□□ -0.41
CDK5Q00535 HSPB1P2-201ENST00000448722 546 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 RNMTL1P1-201ENST00000454103 560 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.51□□□□□ -0.41
CDK5Q00535 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 AC021723.1-201ENST00000486306 515 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.51□□□□□ -0.41
CDK5Q00535 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 SLC25A15P3-201ENST00000505530 290 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.51□□□□□ -0.41
CDK5Q00535 AP005018.1-201ENST00000525475 301 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.51□□□□□ -0.41
CDK5Q00535 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.51□□□□□ -0.41
CDK5Q00535 AC005730.2-201ENST00000564549 1184 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 MIR4741-201ENST00000579822 90 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC12.51□□□□□ -0.41
CDK5Q00535 BNIP3P13-201ENST00000599968 566 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.51□□□□□ -0.41
CDK5Q00535 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.51□□□□□ -0.41
CDK5Q00535 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.51□□□□□ -0.41
CDK5Q00535 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.51□□□□□ -0.41
CDK5Q00535 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.51□□□□□ -0.41
CDK5Q00535 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.51□□□□□ -0.41
CDK5Q00535 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.51□□□□□ -0.41
CDK5Q00535 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.51□□□□□ -0.41
CDK5Q00535 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CDK5Q00535 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 KRT8P43-201ENST00000406052 1458 ntBASIC12.51□□□□□ -0.41
CDK5Q00535 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CDK5Q00535 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms