Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLDN20P56880 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CLDN20P56880 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 KRT8P31-201ENST00000504812 1408 ntBASIC12.79□□□□□ -0.36
CLDN20P56880 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDN20P56880 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.79□□□□□ -0.36
CLDN20P56880 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 AC067931.2-201ENST00000623655 2003 ntBASIC12.79□□□□□ -0.36
CLDN20P56880 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDN20P56880 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
CLDN20P56880 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDN20P56880 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDN20P56880 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CLDN20P56880 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDN20P56880 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CLDN20P56880 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDN20P56880 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDN20P56880 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 AC073869.2-201ENST00000417338 1026 ntBASIC12.79□□□□□ -0.36
CLDN20P56880 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 AP000358.1-201ENST00000456260 156 ntBASIC12.79□□□□□ -0.36
CLDN20P56880 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.79□□□□□ -0.36
CLDN20P56880 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.79□□□□□ -0.36
CLDN20P56880 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDN20P56880 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.79□□□□□ -0.36
CLDN20P56880 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CLDN20P56880 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
CLDN20P56880 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CLDN20P56880 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLDN20P56880 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN20P56880 AL157996.1-201ENST00000624684 2299 ntBASIC12.78□□□□□ -0.36
CLDN20P56880 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN20P56880 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 AP001972.5-201ENST00000624624 2338 ntBASIC12.78□□□□□ -0.36
CLDN20P56880 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.78□□□□□ -0.36
CLDN20P56880 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.78□□□□□ -0.36
CLDN20P56880 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CLDN20P56880 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.78□□□□□ -0.36
CLDN20P56880 AC103592.1-201ENST00000394513 664 ntBASIC12.78□□□□□ -0.36
CLDN20P56880 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.78□□□□□ -0.36
CLDN20P56880 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.78□□□□□ -0.36
CLDN20P56880 DUTP3-201ENST00000450025 415 ntBASIC12.78□□□□□ -0.36
CLDN20P56880 KRT18P15-201ENST00000458108 1291 ntBASIC12.78□□□□□ -0.36
CLDN20P56880 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 AC114947.1-202ENST00000514136 344 ntBASIC12.78□□□□□ -0.36
CLDN20P56880 RNA5SP423-201ENST00000517127 109 ntBASIC12.78□□□□□ -0.36
CLDN20P56880 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN20P56880 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.78□□□□□ -0.36
CLDN20P56880 AC007326.1-201ENST00000604539 458 ntBASIC12.78□□□□□ -0.36
CLDN20P56880 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.78□□□□□ -0.36
CLDN20P56880 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
CLDN20P56880 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN20P56880 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN20P56880 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.78□□□□□ -0.36
CLDN20P56880 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN20P56880 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
CLDN20P56880 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms