Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 MOV10-204ENST00000413052 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 LOXL2-201ENST00000389131 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 MPP2-203ENST00000461854 3462 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-5P52952 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NKX2-5P52952 POLR3H-203ENST00000396504 4176 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
NKX2-5P52952 SIN3A-208ENST00000567289 4078 ntTSL 2 BASIC11.71□□□□□ -0.53
NKX2-5P52952 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-5P52952 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.71□□□□□ -0.53
NKX2-5P52952 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC11.71□□□□□ -0.53
NKX2-5P52952 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-5P52952 VGLL4-201ENST00000273038 3725 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-5P52952 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
NKX2-5P52952 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-5P52952 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-5P52952 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
NKX2-5P52952 ANXA4-201ENST00000394295 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-5P52952 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-5P52952 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.71□□□□□ -0.53
NKX2-5P52952 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-5P52952 AC012313.8-201ENST00000595059 5402 ntBASIC11.71□□□□□ -0.53
NKX2-5P52952 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
NKX2-5P52952 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.71□□□□□ -0.53
NKX2-5P52952 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.71□□□□□ -0.53
NKX2-5P52952 TUBB2BP1-201ENST00000404155 871 ntBASIC11.71□□□□□ -0.53
NKX2-5P52952 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
NKX2-5P52952 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-5P52952 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-5P52952 RPL13P2-201ENST00000440687 659 ntBASIC11.71□□□□□ -0.53
NKX2-5P52952 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
NKX2-5P52952 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
NKX2-5P52952 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-5P52952 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.71□□□□□ -0.53
NKX2-5P52952 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.71□□□□□ -0.53
NKX2-5P52952 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.71□□□□□ -0.53
NKX2-5P52952 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
NKX2-5P52952 AC023141.13-201ENST00000604991 943 ntBASIC11.71□□□□□ -0.53
NKX2-5P52952 LINC01115-203ENST00000606068 577 ntBASIC11.71□□□□□ -0.53
NKX2-5P52952 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.71□□□□□ -0.53
NKX2-5P52952 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.71□□□□□ -0.53
NKX2-5P52952 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.71□□□□□ -0.53
NKX2-5P52952 TP53AIP1-206ENST00000602346 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-5P52952 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-5P52952 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC11.71□□□□□ -0.53
NKX2-5P52952 RAB7B-202ENST00000617991 3014 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
NKX2-5P52952 LRP5L-208ENST00000610821 3602 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 TMEM198B-202ENST00000478241 2924 ntTSL 2 BASIC11.71□□□□□ -0.54
NKX2-5P52952 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
NKX2-5P52952 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
NKX2-5P52952 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.71□□□□□ -0.54
NKX2-5P52952 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC11.71□□□□□ -0.54
NKX2-5P52952 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 MAP3K3-208ENST00000579585 3352 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 ALAS1-201ENST00000310271 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 UBA3-202ENST00000361055 2154 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC11.71□□□□□ -0.54
NKX2-5P52952 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 CNOT2-202ENST00000418359 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.71□□□□□ -0.54
NKX2-5P52952 LCTL-201ENST00000341509 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
NKX2-5P52952 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 LONP2-203ENST00000535754 2580 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-5P52952 ZNF814-215ENST00000614383 2006 ntTSL 5 BASIC11.7□□□□□ -0.54
NKX2-5P52952 KLK2-201ENST00000325321 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 BCAS1-201ENST00000371435 3020 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC11.7□□□□□ -0.54
NKX2-5P52952 AC122688.3-201ENST00000623804 3467 ntBASIC11.7□□□□□ -0.54
NKX2-5P52952 BGN-201ENST00000331595 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 PPARD-203ENST00000360694 3747 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
NKX2-5P52952 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 AC005154.3-201ENST00000419639 1393 ntBASIC11.7□□□□□ -0.54
NKX2-5P52952 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 IRF5-201ENST00000249375 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 BRINP2-201ENST00000361539 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 ZNF549-201ENST00000240719 3969 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
NKX2-5P52952 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.7□□□□□ -0.54
NKX2-5P52952 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.7□□□□□ -0.54
NKX2-5P52952 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 CTCFL-202ENST00000371196 3491 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
NKX2-5P52952 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
NKX2-5P52952 AC005537.1-203ENST00000629291 1748 ntTSL 5 BASIC11.7□□□□□ -0.54
NKX2-5P52952 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
NKX2-5P52952 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
NKX2-5P52952 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.7□□□□□ -0.54
NKX2-5P52952 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.7□□□□□ -0.54
NKX2-5P52952 SPDYE17-201ENST00000412399 783 ntBASIC11.7□□□□□ -0.54
NKX2-5P52952 ARSEP1-201ENST00000420443 635 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms