RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 NISCHQ9Y2I1 1504 aa20.51■□□□□ 0.87
SIN3A-208ENST00000567289 DCAF8L2P0C7V8 631 aa19.88■□□□□ 0.77
SIN3A-208ENST00000567289 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
SIN3A-208ENST00000567289 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
SIN3A-208ENST00000567289 PCGF6Q9BYE7 350 aa19.25■□□□□ 0.67
SIN3A-208ENST00000567289 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
SIN3A-208ENST00000567289 PPARGC1BQ86YN6 1023 aaKnown RBP18.7■□□□□ 0.58
SIN3A-208ENST00000567289 FAM9AQ8IZU1 332 aaPredicted RBP18.7■□□□□ 0.58
SIN3A-208ENST00000567289 HRCP23327 699 aa18.64■□□□□ 0.57
SIN3A-208ENST00000567289 TTBK1Q5TCY1 1321 aaPredicted RBP18.59■□□□□ 0.57
SIN3A-208ENST00000567289 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
SIN3A-208ENST00000567289 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.52
SIN3A-208ENST00000567289 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
SIN3A-208ENST00000567289 CCER1Q8TC90 406 aaPredicted RBP18.22■□□□□ 0.51
SIN3A-208ENST00000567289 YTHDC1Q96MU7 727 aaKnown RBP18.2■□□□□ 0.5
SIN3A-208ENST00000567289 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
SIN3A-208ENST00000567289 CENPBP07199 599 aaPredicted RBP18.13■□□□□ 0.49
SIN3A-208ENST00000567289 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
SIN3A-208ENST00000567289 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
SIN3A-208ENST00000567289 RANGAP1P46060 587 aaPredicted RBP17.96■□□□□ 0.47
SIN3A-208ENST00000567289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.83■□□□□ 0.44
SIN3A-208ENST00000567289 APLP2Q06481 763 aa17.8■□□□□ 0.44
SIN3A-208ENST00000567289 GTF3C3Q9Y5Q9 886 aa17.69■□□□□ 0.42
SIN3A-208ENST00000567289 UBTFP17480 764 aaKnown RBP17.67■□□□□ 0.42
SIN3A-208ENST00000567289 MYT1Q01538 1121 aa17.64■□□□□ 0.41
SIN3A-208ENST00000567289 DIEXFQ68CQ4 756 aaKnown RBP17.63■□□□□ 0.41
SIN3A-208ENST00000567289 HNRNPUL2Q1KMD3 747 aaKnown RBP17.52■□□□□ 0.4
SIN3A-208ENST00000567289 SCAF1Q9H7N4 1312 aaKnown RBP17.51■□□□□ 0.39
SIN3A-208ENST00000567289 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
SIN3A-208ENST00000567289 ERICH6Q7L0X2 663 aa17.47■□□□□ 0.39
SIN3A-208ENST00000567289 ACIN1Q9UKV3 1341 aaKnown RBP17.44■□□□□ 0.38
SIN3A-208ENST00000567289 NEUROD1Q13562 356 aa17.37■□□□□ 0.37
SIN3A-208ENST00000567289 ITGAEP38570 1179 aa17.34■□□□□ 0.37
SIN3A-208ENST00000567289 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
SIN3A-208ENST00000567289 NEFLP07196 543 aa17.31■□□□□ 0.36
SIN3A-208ENST00000567289 ZCCHC6Q5VYS8 1495 aaKnown RBP17.3■□□□□ 0.36
SIN3A-208ENST00000567289 BCANQ96GW7 911 aa17.27■□□□□ 0.36
SIN3A-208ENST00000567289 CNGB1Q14028 1251 aaPredicted RBP17.11■□□□□ 0.33
SIN3A-208ENST00000567289 ZNF316A6NFI3 1004 aaPredicted RBP17.1■□□□□ 0.33
SIN3A-208ENST00000567289 DCAF1Q9Y4B6 1507 aa17.04■□□□□ 0.32
SIN3A-208ENST00000567289 CCDC180Q9P1Z9 1646 aa16.91■□□□□ 0.3
SIN3A-208ENST00000567289 MIER1Q8N108 512 aa16.91■□□□□ 0.3
SIN3A-208ENST00000567289 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
SIN3A-208ENST00000567289 FKBP8Q14318 412 aa16.74■□□□□ 0.27
SIN3A-208ENST00000567289 FAM50AQ14320 339 aaKnown RBP16.69■□□□□ 0.26
SIN3A-208ENST00000567289 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
SIN3A-208ENST00000567289 TRIM52Q96A61 297 aa16.62■□□□□ 0.25
SIN3A-208ENST00000567289 DDX10Q13206 875 aaKnown RBP16.6■□□□□ 0.25
SIN3A-208ENST00000567289 HIRIP3Q9BW71 556 aaPredicted RBP16.59■□□□□ 0.25
SIN3A-208ENST00000567289 ANP32CO43423 234 aa16.58■□□□□ 0.24
SIN3A-208ENST00000567289 RTL5Q5HYW3 569 aaPredicted RBP16.58■□□□□ 0.24
SIN3A-208ENST00000567289 CDK11AQ9UQ88 783 aaPredicted RBP16.58■□□□□ 0.24
SIN3A-208ENST00000567289 IRX6P78412 446 aaPredicted RBP16.54■□□□□ 0.24
SIN3A-208ENST00000567289 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
SIN3A-208ENST00000567289 RSF1Q96T23 1441 aaPredicted RBP16.51■□□□□ 0.23
SIN3A-208ENST00000567289 DAXXQ9UER7 740 aaPredicted RBP16.5■□□□□ 0.23
SIN3A-208ENST00000567289 SCRIBQ14160 1630 aa16.49■□□□□ 0.23
SIN3A-208ENST00000567289 P3H3Q8IVL6 736 aa16.44■□□□□ 0.22
SIN3A-208ENST00000567289 ANP32EQ9BTT0 268 aa16.43■□□□□ 0.22
SIN3A-208ENST00000567289 NBR1Q14596 966 aa16.43■□□□□ 0.22
SIN3A-208ENST00000567289 HNRNPUQ00839 825 aaKnown RBP eCLIP16.42■□□□□ 0.22
SIN3A-208ENST00000567289 SUPT16HQ9Y5B9 1047 aaKnown RBP16.41■□□□□ 0.22
SIN3A-208ENST00000567289 ABCC9O60706 1549 aa16.4■□□□□ 0.22
SIN3A-208ENST00000567289 NPM2Q86SE8 214 aaKnown RBP16.38■□□□□ 0.21
SIN3A-208ENST00000567289 ZNF326Q5BKZ1 582 aaKnown RBP16.38■□□□□ 0.21
SIN3A-208ENST00000567289 SENP3-EIF4A1A0A087X0R7 540 aa16.35■□□□□ 0.21
SIN3A-208ENST00000567289 RB1CC1Q8TDY2 1594 aa16.34■□□□□ 0.21
SIN3A-208ENST00000567289 BCL11AQ9H165 835 aa16.32■□□□□ 0.2
SIN3A-208ENST00000567289 FAM9BQ8IZU0 186 aa16.32■□□□□ 0.2
SIN3A-208ENST00000567289 CLSPNQ9HAW4 1339 aa16.28■□□□□ 0.2
SIN3A-208ENST00000567289 ARID3CA6NKF2 412 aa16.26■□□□□ 0.19
SIN3A-208ENST00000567289 EIF5BO60841 1220 aaKnown RBP16.26■□□□□ 0.19
SIN3A-208ENST00000567289 CEP162Q5TB80 1403 aa16.25■□□□□ 0.19
SIN3A-208ENST00000567289 SALL2Q9Y467 1007 aaPredicted RBP16.23■□□□□ 0.19
SIN3A-208ENST00000567289 ANP32AP39687 249 aaKnown RBP16.21■□□□□ 0.19
SIN3A-208ENST00000567289 CECR2Q9BXF3 1484 aa16.2■□□□□ 0.18
SIN3A-208ENST00000567289 TSHZ2Q9NRE2 1034 aa16.19■□□□□ 0.18
SIN3A-208ENST00000567289 KCNH8Q96L42 1107 aa16.14■□□□□ 0.17
SIN3A-208ENST00000567289 SIN3AQ96ST3 1273 aa16.14■□□□□ 0.17
SIN3A-208ENST00000567289 RBM19Q9Y4C8 960 aaKnown RBP16.13■□□□□ 0.17
SIN3A-208ENST00000567289 CLIP1P30622 1438 aa16.11■□□□□ 0.17
SIN3A-208ENST00000567289 TONSLQ96HA7 1378 aa16.11■□□□□ 0.17
SIN3A-208ENST00000567289 RTN4Q9NQC3 1192 aaKnown RBP16.11■□□□□ 0.17
SIN3A-208ENST00000567289 CCDC136Q96JN2 1154 aa16.09■□□□□ 0.17
SIN3A-208ENST00000567289 CHIC2Q9UKJ5 165 aa16.07■□□□□ 0.16
SIN3A-208ENST00000567289 MROH2BQ7Z745 1585 aa16.07■□□□□ 0.16
SIN3A-208ENST00000567289 MRS2Q9HD23 443 aa16.07■□□□□ 0.16
SIN3A-208ENST00000567289 SLC4A1APQ9BWU0 796 aaKnown RBP16.06■□□□□ 0.16
SIN3A-208ENST00000567289 ZBTB47Q9UFB7 747 aaPredicted RBP16.06■□□□□ 0.16
SIN3A-208ENST00000567289 B4GALNT3Q6L9W6 998 aa16.02■□□□□ 0.16
SIN3A-208ENST00000567289 ARXQ96QS3 562 aa16.02■□□□□ 0.16
SIN3A-208ENST00000567289 SOGA1O94964 1423 aa16.01■□□□□ 0.15
SIN3A-208ENST00000567289 MYT1LQ9UL68 1186 aa15.99■□□□□ 0.15
SIN3A-208ENST00000567289 TNIKQ9UKE5 1360 aa15.97■□□□□ 0.15
SIN3A-208ENST00000567289 WIZO95785 1651 aa15.97■□□□□ 0.15
SIN3A-208ENST00000567289 ABCC8Q09428 1581 aa15.92■□□□□ 0.14
SIN3A-208ENST00000567289 DEKP35659 375 aaKnown RBP15.91■□□□□ 0.14
SIN3A-208ENST00000567289 LAS1LQ9Y4W2 734 aaKnown RBP15.91■□□□□ 0.14
SIN3A-208ENST00000567289 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
SIN3A-208ENST00000567289 KANK4Q5T7N3 995 aaPredicted RBP15.89■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms