Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SLC1A1P43005 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC1A1P43005 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SLC1A1P43005 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A1P43005 Z82170.1-201ENST00000625081 3192 ntBASIC14.53□□□□□ -0.08
SLC1A1P43005 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A1P43005 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.52□□□□□ -0.08
SLC1A1P43005 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A1P43005 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
SLC1A1P43005 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.52□□□□□ -0.08
SLC1A1P43005 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC14.52□□□□□ -0.08
SLC1A1P43005 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC14.52□□□□□ -0.08
SLC1A1P43005 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
SLC1A1P43005 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.52□□□□□ -0.08
SLC1A1P43005 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14.52□□□□□ -0.08
SLC1A1P43005 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.52□□□□□ -0.08
SLC1A1P43005 AL157791.1-201ENST00000553667 1699 ntBASIC14.52□□□□□ -0.08
SLC1A1P43005 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A1P43005 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
SLC1A1P43005 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A1P43005 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SLC1A1P43005 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A1P43005 KRT8P18-201ENST00000413425 1445 ntBASIC14.52□□□□□ -0.08
SLC1A1P43005 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.52□□□□□ -0.08
SLC1A1P43005 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A1P43005 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A1P43005 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A1P43005 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A1P43005 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A1P43005 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.52□□□□□ -0.08
SLC1A1P43005 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A1P43005 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC1A1P43005 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A1P43005 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.52□□□□□ -0.09
SLC1A1P43005 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A1P43005 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.52□□□□□ -0.09
SLC1A1P43005 AL645939.5-201ENST00000606834 243 ntBASIC14.52□□□□□ -0.09
SLC1A1P43005 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC1A1P43005 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.52□□□□□ -0.09
SLC1A1P43005 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SLC1A1P43005 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.52□□□□□ -0.09
SLC1A1P43005 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A1P43005 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC1A1P43005 CICP9-201ENST00000444451 1913 ntBASIC14.52□□□□□ -0.09
SLC1A1P43005 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC14.52□□□□□ -0.09
SLC1A1P43005 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A1P43005 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC1A1P43005 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC1A1P43005 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A1P43005 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC1A1P43005 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SLC1A1P43005 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC1A1P43005 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC1A1P43005 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A1P43005 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A1P43005 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.51□□□□□ -0.09
SLC1A1P43005 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.51□□□□□ -0.09
SLC1A1P43005 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.51□□□□□ -0.09
SLC1A1P43005 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.51□□□□□ -0.09
SLC1A1P43005 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.51□□□□□ -0.09
SLC1A1P43005 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
SLC1A1P43005 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SLC1A1P43005 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.51□□□□□ -0.09
SLC1A1P43005 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.51□□□□□ -0.09
SLC1A1P43005 AC073869.2-201ENST00000417338 1026 ntBASIC14.51□□□□□ -0.09
SLC1A1P43005 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.51□□□□□ -0.09
SLC1A1P43005 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.51□□□□□ -0.09
SLC1A1P43005 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SLC1A1P43005 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.51□□□□□ -0.09
SLC1A1P43005 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SLC1A1P43005 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC14.51□□□□□ -0.09
SLC1A1P43005 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.51□□□□□ -0.09
SLC1A1P43005 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SLC1A1P43005 PES1P2-201ENST00000449745 1735 ntBASIC14.51□□□□□ -0.09
SLC1A1P43005 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 IL9RP3-201ENST00000442856 1674 ntBASIC14.51□□□□□ -0.09
SLC1A1P43005 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SLC1A1P43005 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SLC1A1P43005 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 PI4KAP2-201ENST00000360806 2080 ntBASIC14.51□□□□□ -0.09
SLC1A1P43005 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC1A1P43005 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms