Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 ABCD1P2-201ENST00000429313 1601 ntBASIC12.87□□□□□ -0.35
BMP4P12644 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
BMP4P12644 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
BMP4P12644 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
BMP4P12644 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BMP4P12644 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BMP4P12644 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BMP4P12644 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
BMP4P12644 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
BMP4P12644 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BMP4P12644 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
BMP4P12644 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BMP4P12644 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.87□□□□□ -0.35
BMP4P12644 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
BMP4P12644 AC022364.1-202ENST00000617468 2409 ntBASIC12.87□□□□□ -0.35
BMP4P12644 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.87□□□□□ -0.35
BMP4P12644 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.86□□□□□ -0.35
BMP4P12644 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.86□□□□□ -0.35
BMP4P12644 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
BMP4P12644 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
BMP4P12644 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
BMP4P12644 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.86□□□□□ -0.35
BMP4P12644 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.86□□□□□ -0.35
BMP4P12644 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.86□□□□□ -0.35
BMP4P12644 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.86□□□□□ -0.35
BMP4P12644 AL008707.1-201ENST00000422498 534 ntBASIC12.86□□□□□ -0.35
BMP4P12644 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
BMP4P12644 EIF3FP3-201ENST00000434851 1086 ntBASIC12.86□□□□□ -0.35
BMP4P12644 AC091804.1-201ENST00000486888 567 ntBASIC12.86□□□□□ -0.35
BMP4P12644 RPSAP36-202ENST00000494591 1261 ntBASIC12.86□□□□□ -0.35
BMP4P12644 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.86□□□□□ -0.35
BMP4P12644 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.86□□□□□ -0.35
BMP4P12644 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.86□□□□□ -0.35
BMP4P12644 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.86□□□□□ -0.35
BMP4P12644 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.86□□□□□ -0.35
BMP4P12644 MIR3615-201ENST00000581999 87 ntBASIC12.86□□□□□ -0.35
BMP4P12644 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.86□□□□□ -0.35
BMP4P12644 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.86□□□□□ -0.35
BMP4P12644 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.86□□□□□ -0.35
BMP4P12644 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.86□□□□□ -0.35
BMP4P12644 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
BMP4P12644 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
BMP4P12644 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
BMP4P12644 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
BMP4P12644 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
BMP4P12644 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.85□□□□□ -0.35
BMP4P12644 AL136172.1-201ENST00000598590 1394 ntBASIC12.85□□□□□ -0.35
BMP4P12644 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.85□□□□□ -0.35
BMP4P12644 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.85□□□□□ -0.35
BMP4P12644 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.85□□□□□ -0.35
BMP4P12644 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.85□□□□□ -0.35
BMP4P12644 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.85□□□□□ -0.35
BMP4P12644 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.85□□□□□ -0.35
BMP4P12644 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
BMP4P12644 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BMP4P12644 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms