Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.75□□□□□ -0.21
COL6A2P12110 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.75□□□□□ -0.21
COL6A2P12110 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.75□□□□□ -0.21
COL6A2P12110 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.75□□□□□ -0.21
COL6A2P12110 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.75□□□□□ -0.21
COL6A2P12110 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.75□□□□□ -0.21
COL6A2P12110 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.75□□□□□ -0.21
COL6A2P12110 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
COL6A2P12110 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 IL9RP3-201ENST00000442856 1674 ntBASIC13.75□□□□□ -0.21
COL6A2P12110 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
COL6A2P12110 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.75□□□□□ -0.21
COL6A2P12110 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
COL6A2P12110 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.75□□□□□ -0.21
COL6A2P12110 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL6A2P12110 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.75□□□□□ -0.21
COL6A2P12110 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 KRT8P43-201ENST00000406052 1458 ntBASIC13.74□□□□□ -0.21
COL6A2P12110 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
COL6A2P12110 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
COL6A2P12110 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
COL6A2P12110 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
COL6A2P12110 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
COL6A2P12110 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
COL6A2P12110 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
COL6A2P12110 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.74□□□□□ -0.21
COL6A2P12110 OR8T1P-201ENST00000421347 918 ntBASIC13.74□□□□□ -0.21
COL6A2P12110 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.74□□□□□ -0.21
COL6A2P12110 U91328.1-201ENST00000437528 223 ntBASIC13.74□□□□□ -0.21
COL6A2P12110 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.74□□□□□ -0.21
COL6A2P12110 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.74□□□□□ -0.21
COL6A2P12110 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.74□□□□□ -0.21
COL6A2P12110 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.74□□□□□ -0.21
COL6A2P12110 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.74□□□□□ -0.21
COL6A2P12110 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 RN7SL560P-201ENST00000577943 264 ntBASIC13.74□□□□□ -0.21
COL6A2P12110 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.74□□□□□ -0.21
COL6A2P12110 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.74□□□□□ -0.21
COL6A2P12110 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.74□□□□□ -0.21
COL6A2P12110 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 AC067931.2-201ENST00000623655 2003 ntBASIC13.74□□□□□ -0.21
COL6A2P12110 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.74□□□□□ -0.21
COL6A2P12110 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
COL6A2P12110 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC13.74□□□□□ -0.21
COL6A2P12110 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.74□□□□□ -0.21
COL6A2P12110 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL6A2P12110 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
COL6A2P12110 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.73□□□□□ -0.21
COL6A2P12110 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.73□□□□□ -0.21
COL6A2P12110 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.73□□□□□ -0.21
COL6A2P12110 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
COL6A2P12110 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.73□□□□□ -0.21
COL6A2P12110 CICP9-201ENST00000444451 1913 ntBASIC13.73□□□□□ -0.21
COL6A2P12110 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.73□□□□□ -0.21
COL6A2P12110 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.73□□□□□ -0.21
COL6A2P12110 RNA5SP359-201ENST00000364838 113 ntBASIC13.73□□□□□ -0.21
COL6A2P12110 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
COL6A2P12110 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.73□□□□□ -0.21
COL6A2P12110 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL6A2P12110 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms