Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
SCN2BO60939 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCN2BO60939 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCN2BO60939 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCN2BO60939 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCN2BO60939 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCN2BO60939 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.19□□□□□ -0.3
SCN2BO60939 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.19□□□□□ -0.3
SCN2BO60939 KRT8P43-201ENST00000406052 1458 ntBASIC13.19□□□□□ -0.3
SCN2BO60939 AF013593.1-201ENST00000458074 1487 ntBASIC13.19□□□□□ -0.3
SCN2BO60939 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.19□□□□□ -0.3
SCN2BO60939 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.19□□□□□ -0.3
SCN2BO60939 AC020763.3-201ENST00000625095 2904 ntBASIC13.19□□□□□ -0.3
SCN2BO60939 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCN2BO60939 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SCN2BO60939 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.19□□□□□ -0.3
SCN2BO60939 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCN2BO60939 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.19□□□□□ -0.3
SCN2BO60939 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.19□□□□□ -0.3
SCN2BO60939 FAM8A2P-201ENST00000528813 1142 ntBASIC13.19□□□□□ -0.3
SCN2BO60939 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.19□□□□□ -0.3
SCN2BO60939 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.19□□□□□ -0.3
SCN2BO60939 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.19□□□□□ -0.3
SCN2BO60939 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.19□□□□□ -0.3
SCN2BO60939 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.19□□□□□ -0.3
SCN2BO60939 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.19□□□□□ -0.3
SCN2BO60939 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.19□□□□□ -0.3
SCN2BO60939 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SCN2BO60939 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCN2BO60939 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
SCN2BO60939 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.19□□□□□ -0.3
SCN2BO60939 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.19□□□□□ -0.3
SCN2BO60939 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
SCN2BO60939 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SCN2BO60939 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.19□□□□□ -0.3
SCN2BO60939 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.19□□□□□ -0.3
SCN2BO60939 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SCN2BO60939 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.19□□□□□ -0.3
SCN2BO60939 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC13.18□□□□□ -0.3
SCN2BO60939 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.18□□□□□ -0.3
SCN2BO60939 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
SCN2BO60939 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.18□□□□□ -0.3
SCN2BO60939 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 LINC00567-201ENST00000569854 3409 ntBASIC13.18□□□□□ -0.3
SCN2BO60939 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.18□□□□□ -0.3
SCN2BO60939 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 RNA5SP359-201ENST00000364838 113 ntBASIC13.18□□□□□ -0.3
SCN2BO60939 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SCN2BO60939 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SCN2BO60939 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.18□□□□□ -0.3
SCN2BO60939 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.18□□□□□ -0.3
SCN2BO60939 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.18□□□□□ -0.3
SCN2BO60939 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.18□□□□□ -0.3
SCN2BO60939 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.18□□□□□ -0.3
SCN2BO60939 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.18□□□□□ -0.3
SCN2BO60939 AC013355.1-201ENST00000562625 723 ntBASIC13.18□□□□□ -0.3
SCN2BO60939 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.18□□□□□ -0.3
SCN2BO60939 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.18□□□□□ -0.3
SCN2BO60939 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.18□□□□□ -0.3
SCN2BO60939 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.18□□□□□ -0.3
SCN2BO60939 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SCN2BO60939 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.18□□□□□ -0.3
SCN2BO60939 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SCN2BO60939 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 PCDHB19P-202ENST00000625133 2914 ntBASIC13.18□□□□□ -0.3
SCN2BO60939 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SCN2BO60939 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SCN2BO60939 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC13.18□□□□□ -0.3
SCN2BO60939 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC13.18□□□□□ -0.3
SCN2BO60939 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
SCN2BO60939 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.17□□□□□ -0.3
SCN2BO60939 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 KRT8P21-201ENST00000430398 1491 ntBASIC13.17□□□□□ -0.3
SCN2BO60939 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC13.17□□□□□ -0.3
SCN2BO60939 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.17□□□□□ -0.3
SCN2BO60939 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SCN2BO60939 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.17□□□□□ -0.3
SCN2BO60939 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
SCN2BO60939 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SCN2BO60939 OR8S1-201ENST00000310194 1080 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms