Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AMT-256ENST00000638063 1783 ntTSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AC073957.3-201ENST00000609998 6758 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AP000437.1-201ENST00000624057 2085 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 FAM86MP-201ENST00000340703 885 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 NCR3-202ENST00000376071 541 ntTSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 HNRNPA1P41-201ENST00000397777 928 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AL008707.1-201ENST00000422498 534 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 RHEB-207ENST00000496004 744 ntTSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AC092658.1-201ENST00000505836 891 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AC093752.3-201ENST00000567343 901 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 MIR3615-201ENST00000581999 87 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 KC6-205ENST00000599934 556 ntTSL 4 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AL451050.2-201ENST00000606967 682 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AL022334.2-201ENST00000610000 484 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AC100757.4-201ENST00000626934 759 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 LINC01815-202ENST00000641468 1409 ntBASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HLA-DRB4X5D2U9 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 AGAP10P-201ENST00000454844 2418 ntBASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 CRCP-204ENST00000398684 492 ntTSL 2 BASIC10.54□□□□□ -0.72
HLA-DRB4X5D2U9 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms