Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 AC091181.1-201ENST00000623762 2098 ntBASIC15.51■□□□□ 0.07
CBX8Q9HC52 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 AC011742.3-201ENST00000439053 820 ntBASIC15.5■□□□□ 0.07
CBX8Q9HC52 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 SCARNA21-201ENST00000517026 139 ntBASIC15.5■□□□□ 0.07
CBX8Q9HC52 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CBX8Q9HC52 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CBX8Q9HC52 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX8Q9HC52 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX8Q9HC52 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX8Q9HC52 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CBX8Q9HC52 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX8Q9HC52 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX8Q9HC52 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CBX8Q9HC52 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
CBX8Q9HC52 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.49■□□□□ 0.07
CBX8Q9HC52 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX8Q9HC52 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX8Q9HC52 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX8Q9HC52 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC15.49■□□□□ 0.07
CBX8Q9HC52 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX8Q9HC52 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC15.49■□□□□ 0.07
CBX8Q9HC52 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX8Q9HC52 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC15.49■□□□□ 0.07
CBX8Q9HC52 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CBX8Q9HC52 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX8Q9HC52 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CBX8Q9HC52 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.49■□□□□ 0.07
CBX8Q9HC52 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.49■□□□□ 0.07
CBX8Q9HC52 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.49■□□□□ 0.07
CBX8Q9HC52 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CBX8Q9HC52 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CBX8Q9HC52 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms