Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 CHCHD2P6-201ENST00000454346 447 ntBASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 AC099552.4-201ENST00000624248 949 ntBASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 AC245369.8-201ENST00000636589 306 ntBASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 PTN-202ENST00000393083 1599 ntTSL 5 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 MYADML-201ENST00000474610 2147 ntBASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.48□□□□□ -0.57
CCDC168Q8NDH2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 RNF7-202ENST00000393000 805 ntTSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 AL121994.1-201ENST00000413189 402 ntBASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 CLK2P1-201ENST00000416636 1294 ntBASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 AC079250.1-201ENST00000456046 531 ntBASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 AP001102.1-201ENST00000528959 409 ntBASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 SORD2P-201ENST00000558556 1069 ntBASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 AC091736.1-201ENST00000609370 305 ntBASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 AL391903.1-201ENST00000407513 365 ntBASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 RPL3P9-201ENST00000463217 1183 ntBASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 MIR8071-1-201ENST00000616769 65 ntBASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 MIR8071-2-201ENST00000616772 65 ntBASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
CCDC168Q8NDH2 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms