Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDM3BQ7LBC6 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KDM3BQ7LBC6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 OR2T32P-201ENST00000403423 963 ntBASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 AC005822.1-201ENST00000414124 1034 ntBASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 AC000077.1-201ENST00000420012 953 ntBASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 RN7SL524P-201ENST00000581152 300 ntBASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 LINC00643-207ENST00000637212 734 ntBASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 AC244154.1-201ENST00000620148 1555 ntBASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 AC104758.3-203ENST00000562938 2123 ntBASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 AL121994.1-201ENST00000413189 402 ntBASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 RBM14-205ENST00000443702 732 ntTSL 3 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 RPS15P5-201ENST00000449885 432 ntBASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 AC009118.3-201ENST00000622896 873 ntBASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDM3BQ7LBC6 AC009093.9-201ENST00000566038 1611 ntBASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 AC011239.2-201ENST00000624820 1489 ntBASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 MARCKSL1P2-201ENST00000401037 976 ntBASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 IQCF4-203ENST00000428561 420 ntBASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 DUX4L31-201ENST00000446466 1136 ntBASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 TULP3P1-202ENST00000453253 1291 ntBASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 AL137028.2-201ENST00000614601 256 ntBASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 AC002350.2-201ENST00000623894 1828 ntBASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM3BQ7LBC6 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.08■□□□□ 0.33
KDM3BQ7LBC6 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms