Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA2D1P54289 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA2D1P54289 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 RPL7P35-201ENST00000446943 740 ntBASIC14.75□□□□□ -0.05
CACNA2D1P54289 GRPEL2P1-201ENST00000453145 339 ntBASIC14.75□□□□□ -0.05
CACNA2D1P54289 AC079112.1-201ENST00000454972 939 ntBASIC14.75□□□□□ -0.05
CACNA2D1P54289 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 MIR4649-201ENST00000582839 64 ntBASIC14.75□□□□□ -0.05
CACNA2D1P54289 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA2D1P54289 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA2D1P54289 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA2D1P54289 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA2D1P54289 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA2D1P54289 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA2D1P54289 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA2D1P54289 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 RNVU1-8-201ENST00000364272 125 ntBASIC14.74□□□□□ -0.05
CACNA2D1P54289 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 OR52M2P-201ENST00000414298 959 ntBASIC14.74□□□□□ -0.05
CACNA2D1P54289 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 EEF1DP2-201ENST00000433698 843 ntBASIC14.74□□□□□ -0.05
CACNA2D1P54289 DPY19L2P5-201ENST00000456300 331 ntBASIC14.74□□□□□ -0.05
CACNA2D1P54289 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.74□□□□□ -0.05
CACNA2D1P54289 AL161773.1-201ENST00000624845 863 ntBASIC14.74□□□□□ -0.05
CACNA2D1P54289 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CACNA2D1P54289 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.74□□□□□ -0.05
CACNA2D1P54289 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.73□□□□□ -0.05
CACNA2D1P54289 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CACNA2D1P54289 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms