Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC16.87■□□□□ 0.29
PDE6BP35913 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC16.87■□□□□ 0.29
PDE6BP35913 RN7SL173P-201ENST00000461853 292 ntBASIC16.87■□□□□ 0.29
PDE6BP35913 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC16.87■□□□□ 0.29
PDE6BP35913 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC16.87■□□□□ 0.29
PDE6BP35913 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC16.87■□□□□ 0.29
PDE6BP35913 AL353622.2-201ENST00000605846 425 ntBASIC16.87■□□□□ 0.29
PDE6BP35913 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC16.87■□□□□ 0.29
PDE6BP35913 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDE6BP35913 COG6-212ENST00000630730 186 ntTSL 5 BASIC16.87■□□□□ 0.29
PDE6BP35913 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6BP35913 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6BP35913 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6BP35913 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6BP35913 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.87■□□□□ 0.29
PDE6BP35913 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6BP35913 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.87■□□□□ 0.29
PDE6BP35913 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PDE6BP35913 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6BP35913 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6BP35913 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDE6BP35913 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PDE6BP35913 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDE6BP35913 SNX18-202ENST00000343017 3140 ntBASIC16.87■□□□□ 0.29
PDE6BP35913 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6BP35913 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6BP35913 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PDE6BP35913 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC16.87■□□□□ 0.29
PDE6BP35913 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
PDE6BP35913 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PDE6BP35913 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PDE6BP35913 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.86■□□□□ 0.29
PDE6BP35913 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC16.86■□□□□ 0.29
PDE6BP35913 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PDE6BP35913 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 RPL18AP15-201ENST00000430258 517 ntBASIC16.86■□□□□ 0.29
PDE6BP35913 OR4C14P-201ENST00000440929 923 ntBASIC16.86■□□□□ 0.29
PDE6BP35913 AC108724.1-201ENST00000481669 352 ntBASIC16.86■□□□□ 0.29
PDE6BP35913 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
PDE6BP35913 SAA2-206ENST00000530400 323 ntTSL 3 BASIC16.86■□□□□ 0.29
PDE6BP35913 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PDE6BP35913 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC16.86■□□□□ 0.29
PDE6BP35913 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC16.86■□□□□ 0.29
PDE6BP35913 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC16.86■□□□□ 0.29
PDE6BP35913 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC16.86■□□□□ 0.29
PDE6BP35913 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PDE6BP35913 MDC1-209ENST00000613547 830 ntTSL 5 BASIC16.86■□□□□ 0.29
PDE6BP35913 AC244097.1-201ENST00000621631 1216 ntBASIC16.86■□□□□ 0.29
PDE6BP35913 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
PDE6BP35913 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.86■□□□□ 0.29
PDE6BP35913 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDE6BP35913 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PDE6BP35913 AP001267.2-201ENST00000532619 2086 ntBASIC16.85■□□□□ 0.29
PDE6BP35913 AL513497.1-201ENST00000624273 2083 ntBASIC16.85■□□□□ 0.29
PDE6BP35913 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.85■□□□□ 0.29
PDE6BP35913 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.85■□□□□ 0.29
PDE6BP35913 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.85■□□□□ 0.29
PDE6BP35913 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
PDE6BP35913 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PDE6BP35913 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 INTS4P1-203ENST00000641008 3683 ntBASIC16.85■□□□□ 0.29
PDE6BP35913 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
PDE6BP35913 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC16.85■□□□□ 0.29
PDE6BP35913 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 SERF2-204ENST00000402131 586 ntTSL 2 BASIC16.85■□□□□ 0.29
PDE6BP35913 ACTG1P23-201ENST00000437653 1074 ntBASIC16.85■□□□□ 0.29
PDE6BP35913 UGT1A12P-201ENST00000447084 853 ntBASIC16.85■□□□□ 0.29
PDE6BP35913 IGKV1OR-2-201ENST00000457995 350 ntBASIC16.85■□□□□ 0.29
PDE6BP35913 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms