Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 HAL-202ENST00000538703 2637 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT9P35527 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT9P35527 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT9P35527 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT9P35527 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT9P35527 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT9P35527 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT9P35527 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT9P35527 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT9P35527 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT9P35527 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT9P35527 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT9P35527 AC068587.8-201ENST00000641239 219 ntBASIC15.26■□□□□ 0.03
KRT9P35527 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KRT9P35527 AGGF1P10-201ENST00000635005 2191 ntBASIC15.26■□□□□ 0.03
KRT9P35527 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
KRT9P35527 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KRT9P35527 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT9P35527 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT9P35527 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT9P35527 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
KRT9P35527 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KRT9P35527 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 AC093462.1-201ENST00000621167 1683 ntBASIC15.25■□□□□ 0.03
KRT9P35527 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KRT9P35527 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KRT9P35527 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT9P35527 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT9P35527 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KRT9P35527 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT9P35527 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
KRT9P35527 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.25■□□□□ 0.03
KRT9P35527 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT9P35527 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT9P35527 AC005740.2-201ENST00000511085 419 ntBASIC15.25■□□□□ 0.03
KRT9P35527 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.25■□□□□ 0.03
KRT9P35527 AC126915.1-201ENST00000522847 1038 ntBASIC15.25■□□□□ 0.03
KRT9P35527 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.25■□□□□ 0.03
KRT9P35527 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.25■□□□□ 0.03
KRT9P35527 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.25■□□□□ 0.03
KRT9P35527 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KRT9P35527 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
KRT9P35527 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
KRT9P35527 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT9P35527 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT9P35527 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT9P35527 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 PI4KAP2-201ENST00000360806 2080 ntBASIC15.24■□□□□ 0.03
KRT9P35527 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KRT9P35527 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT9P35527 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
KRT9P35527 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
KRT9P35527 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT9P35527 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
KRT9P35527 DPM3-202ENST00000368399 517 ntBASIC15.24■□□□□ 0.03
KRT9P35527 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
KRT9P35527 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT9P35527 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
KRT9P35527 AC078875.1-201ENST00000431907 724 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms