Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 AC061965.1-201ENST00000560524 1465 ntBASIC11.76□□□□□ -0.53
COL8A2P25067 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
COL8A2P25067 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC11.76□□□□□ -0.53
COL8A2P25067 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.75□□□□□ -0.53
COL8A2P25067 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
COL8A2P25067 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
COL8A2P25067 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC11.75□□□□□ -0.53
COL8A2P25067 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 FAM90A12P-201ENST00000519497 2375 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 FAM90A24P-201ENST00000520792 2369 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.75□□□□□ -0.53
COL8A2P25067 PPT1-213ENST00000641319 2388 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
COL8A2P25067 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 AC111170.3-201ENST00000624282 2464 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 AL928654.5-201ENST00000624831 2501 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
COL8A2P25067 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 AL357563.1-201ENST00000404728 395 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC11.75□□□□□ -0.53
COL8A2P25067 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC11.75□□□□□ -0.53
COL8A2P25067 AC084752.1-201ENST00000509766 622 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 AC100858.1-201ENST00000514059 1228 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 AC226150.1-201ENST00000544259 466 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 VENTXP3-201ENST00000546480 773 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC11.75□□□□□ -0.53
COL8A2P25067 AL132994.1-201ENST00000554098 400 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 AC002044.2-201ENST00000624910 970 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 BEND3P1-201ENST00000421591 1944 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC11.75□□□□□ -0.53
COL8A2P25067 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.75□□□□□ -0.53
COL8A2P25067 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 AC021305.1-201ENST00000520656 1514 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
COL8A2P25067 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 AC008620.2-201ENST00000510294 1569 ntBASIC11.75□□□□□ -0.53
COL8A2P25067 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
COL8A2P25067 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
COL8A2P25067 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
COL8A2P25067 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.74□□□□□ -0.53
COL8A2P25067 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
COL8A2P25067 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
COL8A2P25067 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.74□□□□□ -0.53
COL8A2P25067 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms