Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 OR2T32P-201ENST00000403423 963 ntBASIC18.62■□□□□ 0.57
ATF3P18847 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC18.62■□□□□ 0.57
ATF3P18847 OR52X1P-201ENST00000446117 914 ntBASIC18.62■□□□□ 0.57
ATF3P18847 AC253536.5-201ENST00000506097 347 ntBASIC18.62■□□□□ 0.57
ATF3P18847 MED11-203ENST00000575284 652 ntTSL 3 BASIC18.62■□□□□ 0.57
ATF3P18847 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC18.62■□□□□ 0.57
ATF3P18847 AC015912.3-201ENST00000619432 348 ntBASIC18.62■□□□□ 0.57
ATF3P18847 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC18.62■□□□□ 0.57
ATF3P18847 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC18.62■□□□□ 0.57
ATF3P18847 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC18.62■□□□□ 0.57
ATF3P18847 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC18.62■□□□□ 0.57
ATF3P18847 GOLGA8EP-201ENST00000530246 1959 ntBASIC18.62■□□□□ 0.57
ATF3P18847 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATF3P18847 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF3P18847 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ATF3P18847 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF3P18847 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
ATF3P18847 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF3P18847 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATF3P18847 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF3P18847 AC012617.1-204ENST00000586340 2305 ntBASIC18.61■□□□□ 0.57
ATF3P18847 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.61■□□□□ 0.57
ATF3P18847 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATF3P18847 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC18.61■□□□□ 0.57
ATF3P18847 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATF3P18847 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF3P18847 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.61■□□□□ 0.57
ATF3P18847 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ATF3P18847 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF3P18847 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF3P18847 AL049792.1-201ENST00000424708 1262 ntBASIC18.61■□□□□ 0.57
ATF3P18847 PRDX3P2-201ENST00000447051 611 ntBASIC18.61■□□□□ 0.57
ATF3P18847 CHCHD2P6-201ENST00000454346 447 ntBASIC18.61■□□□□ 0.57
ATF3P18847 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC18.61■□□□□ 0.57
ATF3P18847 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATF3P18847 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC18.61■□□□□ 0.57
ATF3P18847 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC18.61■□□□□ 0.57
ATF3P18847 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF3P18847 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC18.61■□□□□ 0.57
ATF3P18847 FAM223B-202ENST00000598177 713 ntBASIC18.61■□□□□ 0.57
ATF3P18847 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATF3P18847 AC090950.1-202ENST00000605733 644 ntBASIC18.61■□□□□ 0.57
ATF3P18847 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC18.61■□□□□ 0.57
ATF3P18847 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC18.61■□□□□ 0.57
ATF3P18847 FAM223A-202ENST00000625204 713 ntBASIC18.61■□□□□ 0.57
ATF3P18847 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC18.61■□□□□ 0.57
ATF3P18847 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ATF3P18847 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ATF3P18847 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ATF3P18847 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF3P18847 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF3P18847 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.61■□□□□ 0.57
ATF3P18847 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATF3P18847 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF3P18847 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF3P18847 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC18.61■□□□□ 0.57
ATF3P18847 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATF3P18847 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ATF3P18847 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 NORAD-201ENST00000565493 5339 ntBASIC18.6■□□□□ 0.57
ATF3P18847 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ATF3P18847 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
ATF3P18847 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC18.6■□□□□ 0.57
ATF3P18847 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 POLR3DP1-201ENST00000398689 1176 ntBASIC18.6■□□□□ 0.57
ATF3P18847 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC18.6■□□□□ 0.57
ATF3P18847 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
ATF3P18847 RAB42P1-201ENST00000555078 316 ntBASIC18.6■□□□□ 0.57
ATF3P18847 NEMF-210ENST00000556672 590 ntTSL 2 BASIC18.6■□□□□ 0.57
ATF3P18847 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC18.6■□□□□ 0.57
ATF3P18847 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC18.6■□□□□ 0.57
ATF3P18847 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC18.6■□□□□ 0.57
ATF3P18847 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 AC023157.3-201ENST00000619086 2088 ntBASIC18.6■□□□□ 0.57
ATF3P18847 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATF3P18847 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 AC092053.3-201ENST00000641308 4975 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms