Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.44□□□□□ -0.42
APOA1P02647 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.44□□□□□ -0.42
APOA1P02647 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
APOA1P02647 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.44□□□□□ -0.42
APOA1P02647 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.44□□□□□ -0.42
APOA1P02647 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.44□□□□□ -0.42
APOA1P02647 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.44□□□□□ -0.42
APOA1P02647 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
APOA1P02647 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOA1P02647 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOA1P02647 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOA1P02647 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOA1P02647 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOA1P02647 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC12.44□□□□□ -0.42
APOA1P02647 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.44□□□□□ -0.42
APOA1P02647 BTBD7P1-201ENST00000447253 1453 ntBASIC12.44□□□□□ -0.42
APOA1P02647 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.44□□□□□ -0.42
APOA1P02647 PCDHA4-204ENST00000618834 10557 ntBASIC12.44□□□□□ -0.42
APOA1P02647 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOA1P02647 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOA1P02647 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
APOA1P02647 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.44□□□□□ -0.42
APOA1P02647 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOA1P02647 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
APOA1P02647 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.44□□□□□ -0.42
APOA1P02647 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC12.44□□□□□ -0.42
APOA1P02647 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC12.43□□□□□ -0.42
APOA1P02647 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 LGALS8-208ENST00000416919 6097 ntTSL 5 BASIC12.43□□□□□ -0.42
APOA1P02647 AP000350.6-201ENST00000609510 5637 ntBASIC12.43□□□□□ -0.42
APOA1P02647 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC12.43□□□□□ -0.42
APOA1P02647 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
APOA1P02647 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.43□□□□□ -0.42
APOA1P02647 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
APOA1P02647 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 SSR4P1-201ENST00000415143 412 ntBASIC12.43□□□□□ -0.42
APOA1P02647 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.43□□□□□ -0.42
APOA1P02647 INE1-201ENST00000456273 945 ntBASIC12.43□□□□□ -0.42
APOA1P02647 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 RN7SL399P-201ENST00000471648 279 ntBASIC12.43□□□□□ -0.42
APOA1P02647 AP001582.1-201ENST00000525856 295 ntBASIC12.43□□□□□ -0.42
APOA1P02647 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.43□□□□□ -0.42
APOA1P02647 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.43□□□□□ -0.42
APOA1P02647 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
APOA1P02647 AC120114.3-201ENST00000611923 658 ntBASIC12.43□□□□□ -0.42
APOA1P02647 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
APOA1P02647 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
APOA1P02647 FAM200B-223ENST00000622362 4377 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC12.43□□□□□ -0.42
APOA1P02647 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC12.43□□□□□ -0.42
APOA1P02647 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
APOA1P02647 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOA1P02647 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
APOA1P02647 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
APOA1P02647 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.42□□□□□ -0.42
APOA1P02647 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
APOA1P02647 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
APOA1P02647 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms