Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 AC012531.1-201ENST00000562848 2680 ntBASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC19.96■□□□□ 0.79
SHANK2Q9UPX8 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 AC007686.3-201ENST00000619017 3487 ntBASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 SNORD88B-201ENST00000408454 91 ntBASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 TPT1P9-201ENST00000413759 514 ntBASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 HMGA1P2-201ENST00000430198 324 ntBASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 ABCC6P1-203ENST00000565566 1170 ntBASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 AC136475.7-201ENST00000602949 592 ntBASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 AC138627.1-201ENST00000641127 1257 ntBASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 AL928921.2-201ENST00000641325 2442 ntBASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHANK2Q9UPX8 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 RPL18AP15-201ENST00000430258 517 ntBASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 SAP18P2-201ENST00000434334 459 ntBASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 AC026304.1-201ENST00000597953 561 ntBASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC19.94■□□□□ 0.78
SHANK2Q9UPX8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 SNORA30.1-201ENST00000363193 129 ntBASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 AP000346.2-202ENST00000425948 383 ntBASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 RN7SL69P-201ENST00000468423 272 ntBASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 PCTP-206ENST00000573500 919 ntTSL 3 BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 MIR4640-201ENST00000581824 90 ntBASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 AC135782.3-201ENST00000562782 2105 ntBASIC19.93■□□□□ 0.78
SHANK2Q9UPX8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms