Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 CICP9-201ENST00000444451 1913 ntBASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHACTR1Q9C0D0 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 AC022364.1-202ENST00000617468 2409 ntBASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 BRD7P5-201ENST00000299197 1822 ntBASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 SSR4P1-201ENST00000415143 412 ntBASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 HSPB1P2-201ENST00000448722 546 ntBASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 RPL18P13-201ENST00000478088 569 ntBASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 AC116345.2-201ENST00000512837 523 ntBASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 KRT8P29-201ENST00000420409 1371 ntBASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 KC6-207ENST00000600644 2311 ntTSL 3 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PHACTR1Q9C0D0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 AC063926.2-201ENST00000623766 1308 ntBASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 AC010326.4-201ENST00000604665 891 ntBASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 AL035252.4-201ENST00000624174 288 ntBASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.15□□□□□ -0.14
PHACTR1Q9C0D0 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms