Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 AC106818.1-201ENST00000623223 3242 ntBASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 AC004899.1-201ENST00000424687 1714 ntBASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 AC005324.6-201ENST00000587972 613 ntBASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 AP003969.2-201ENST00000623739 2275 ntBASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN22Q8N7P3 AC104758.3-203ENST00000562938 2123 ntBASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 KRT8P29-201ENST00000420409 1371 ntBASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 RNA5SP412-201ENST00000516234 123 ntBASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 AC005695.3-201ENST00000614522 232 ntBASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 LINC00638-201ENST00000555578 2518 ntBASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN22Q8N7P3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 AC018735.1-201ENST00000437208 1502 ntBASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.71□□□□□ -0.38
CLDN22Q8N7P3 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms