Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13CQ709C8 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13CQ709C8 AACS-201ENST00000316519 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13CQ709C8 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13CQ709C8 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
VPS13CQ709C8 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13CQ709C8 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
VPS13CQ709C8 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC11.09□□□□□ -0.63
VPS13CQ709C8 RN7SL646P-201ENST00000492969 297 ntBASIC11.09□□□□□ -0.63
VPS13CQ709C8 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC11.09□□□□□ -0.63
VPS13CQ709C8 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC11.09□□□□□ -0.63
VPS13CQ709C8 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
VPS13CQ709C8 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC11.09□□□□□ -0.63
VPS13CQ709C8 AP000553.2-201ENST00000609038 441 ntBASIC11.09□□□□□ -0.63
VPS13CQ709C8 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.09□□□□□ -0.63
VPS13CQ709C8 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.09□□□□□ -0.63
VPS13CQ709C8 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13CQ709C8 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
VPS13CQ709C8 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13CQ709C8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
VPS13CQ709C8 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC11.08□□□□□ -0.63
VPS13CQ709C8 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC11.08□□□□□ -0.63
VPS13CQ709C8 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC11.08□□□□□ -0.63
VPS13CQ709C8 AC012066.1-201ENST00000439252 694 ntBASIC11.08□□□□□ -0.63
VPS13CQ709C8 OR2A1-AS1-203ENST00000468575 568 ntBASIC11.08□□□□□ -0.63
VPS13CQ709C8 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC11.08□□□□□ -0.63
VPS13CQ709C8 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC11.08□□□□□ -0.63
VPS13CQ709C8 RAB42P1-201ENST00000555078 316 ntBASIC11.08□□□□□ -0.63
VPS13CQ709C8 AL031058.1-201ENST00000561592 888 ntBASIC11.08□□□□□ -0.63
VPS13CQ709C8 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC11.08□□□□□ -0.63
VPS13CQ709C8 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.63
VPS13CQ709C8 AC244097.1-201ENST00000621631 1216 ntBASIC11.08□□□□□ -0.63
VPS13CQ709C8 MIR6819-201ENST00000622122 61 ntBASIC11.08□□□□□ -0.63
VPS13CQ709C8 AC099552.4-201ENST00000624248 949 ntBASIC11.08□□□□□ -0.63
VPS13CQ709C8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
VPS13CQ709C8 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 RPS6-201ENST00000315377 863 ntTSL 3 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 AC112694.1-202ENST00000540985 943 ntBASIC11.08□□□□□ -0.64
VPS13CQ709C8 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 AC009517.1-201ENST00000454750 570 ntBASIC11.08□□□□□ -0.64
VPS13CQ709C8 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 JPT1-205ENST00000470924 663 ntTSL 5 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 SNORD55-201ENST00000581525 80 ntBASIC11.08□□□□□ -0.64
VPS13CQ709C8 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 PCDHA6-201ENST00000378126 3267 ntBASIC11.08□□□□□ -0.64
VPS13CQ709C8 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VPS13CQ709C8 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
VPS13CQ709C8 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 KRT127P-201ENST00000547183 433 ntBASIC11.07□□□□□ -0.64
VPS13CQ709C8 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 AL109983.1-201ENST00000603234 646 ntBASIC11.07□□□□□ -0.64
VPS13CQ709C8 SNORA50D-202ENST00000627561 132 ntBASIC11.07□□□□□ -0.64
VPS13CQ709C8 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 RN7SL638P-201ENST00000494527 290 ntBASIC11.07□□□□□ -0.64
VPS13CQ709C8 AKR1B1P3-201ENST00000525311 588 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms