Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 STK24P1-201ENST00000455035 1291 ntBASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 PARP8-206ENST00000503665 572 ntTSL 4 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 AC226150.1-201ENST00000544259 466 ntBASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 AC025271.4-201ENST00000621477 1726 ntBASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H3F3CQ6NXT2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.9□□□□□ -0.35
H3F3CQ6NXT2 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
H3F3CQ6NXT2 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
H3F3CQ6NXT2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.9□□□□□ -0.35
H3F3CQ6NXT2 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 DMBT1P1-203ENST00000636837 4628 ntBASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 AC016397.2-201ENST00000624848 1985 ntBASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 ACTG1P19-201ENST00000418987 1116 ntBASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 AC025186.1-201ENST00000478174 870 ntBASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 RN7SL375P-201ENST00000492442 298 ntBASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 ALG1L6P-201ENST00000515248 758 ntBASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 AL132994.1-201ENST00000554098 400 ntBASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms