Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.59□□□□□ -0.39
APOBEC1P41238 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.59□□□□□ -0.39
APOBEC1P41238 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOBEC1P41238 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.59□□□□□ -0.39
APOBEC1P41238 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
APOBEC1P41238 ZNF493-208ENST00000599461 1769 ntBASIC12.58□□□□□ -0.39
APOBEC1P41238 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
APOBEC1P41238 COL6A4P2-202ENST00000504443 2753 ntBASIC12.58□□□□□ -0.39
APOBEC1P41238 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
APOBEC1P41238 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
APOBEC1P41238 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
APOBEC1P41238 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.58□□□□□ -0.39
APOBEC1P41238 AC105206.1-202ENST00000314927 2368 ntBASIC12.58□□□□□ -0.4
APOBEC1P41238 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.58□□□□□ -0.4
APOBEC1P41238 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.58□□□□□ -0.4
APOBEC1P41238 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
APOBEC1P41238 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.58□□□□□ -0.4
APOBEC1P41238 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.58□□□□□ -0.4
APOBEC1P41238 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.58□□□□□ -0.4
APOBEC1P41238 BCYRN1-201ENST00000418539 200 ntBASIC12.58□□□□□ -0.4
APOBEC1P41238 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.58□□□□□ -0.4
APOBEC1P41238 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.58□□□□□ -0.4
APOBEC1P41238 AL512306.1-201ENST00000432698 848 ntBASIC12.58□□□□□ -0.4
APOBEC1P41238 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.58□□□□□ -0.4
APOBEC1P41238 RN7SL767P-201ENST00000493013 295 ntBASIC12.58□□□□□ -0.4
APOBEC1P41238 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.58□□□□□ -0.4
APOBEC1P41238 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.58□□□□□ -0.4
APOBEC1P41238 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.58□□□□□ -0.4
APOBEC1P41238 AC138701.2-201ENST00000553634 226 ntBASIC12.58□□□□□ -0.4
APOBEC1P41238 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.58□□□□□ -0.4
APOBEC1P41238 FGFR3P5-201ENST00000564496 886 ntBASIC12.58□□□□□ -0.4
APOBEC1P41238 MIR4326-201ENST00000582203 59 ntBASIC12.58□□□□□ -0.4
APOBEC1P41238 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 AP005264.5-201ENST00000590066 467 ntBASIC12.58□□□□□ -0.4
APOBEC1P41238 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
APOBEC1P41238 AL049840.2-201ENST00000602722 535 ntBASIC12.58□□□□□ -0.4
APOBEC1P41238 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.58□□□□□ -0.4
APOBEC1P41238 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.58□□□□□ -0.4
APOBEC1P41238 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.58□□□□□ -0.4
APOBEC1P41238 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.58□□□□□ -0.4
APOBEC1P41238 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
APOBEC1P41238 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.58□□□□□ -0.4
APOBEC1P41238 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOBEC1P41238 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
APOBEC1P41238 AC040160.2-201ENST00000623816 1675 ntBASIC12.57□□□□□ -0.4
APOBEC1P41238 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.57□□□□□ -0.4
APOBEC1P41238 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
APOBEC1P41238 AGAP12P-201ENST00000585227 2359 ntBASIC12.57□□□□□ -0.4
APOBEC1P41238 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
APOBEC1P41238 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
APOBEC1P41238 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.57□□□□□ -0.4
APOBEC1P41238 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
APOBEC1P41238 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.57□□□□□ -0.4
APOBEC1P41238 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.57□□□□□ -0.4
APOBEC1P41238 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
APOBEC1P41238 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.57□□□□□ -0.4
APOBEC1P41238 CEP164P1-201ENST00000455142 418 ntBASIC12.57□□□□□ -0.4
APOBEC1P41238 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOBEC1P41238 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms