Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT9P35527 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
KRT9P35527 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KRT9P35527 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT9P35527 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.28■□□□□ 0.04
KRT9P35527 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT9P35527 XBP1P1-201ENST00000436573 652 ntBASIC15.28■□□□□ 0.04
KRT9P35527 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KRT9P35527 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT9P35527 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.28■□□□□ 0.04
KRT9P35527 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.28■□□□□ 0.04
KRT9P35527 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT9P35527 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.28■□□□□ 0.04
KRT9P35527 AL008721.1-201ENST00000609964 604 ntBASIC15.28■□□□□ 0.04
KRT9P35527 AC090164.2-201ENST00000611487 516 ntBASIC15.28■□□□□ 0.04
KRT9P35527 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 CICP1-201ENST00000416803 2410 ntBASIC15.28■□□□□ 0.04
KRT9P35527 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 Z98885.3-201ENST00000624882 1757 ntBASIC15.28■□□□□ 0.04
KRT9P35527 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.28■□□□□ 0.04
KRT9P35527 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
KRT9P35527 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.28■□□□□ 0.04
KRT9P35527 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
KRT9P35527 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KRT9P35527 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 LINC01815-202ENST00000641468 1409 ntBASIC15.27■□□□□ 0.04
KRT9P35527 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
KRT9P35527 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT9P35527 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
KRT9P35527 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
KRT9P35527 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
KRT9P35527 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT9P35527 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT9P35527 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRT9P35527 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
KRT9P35527 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT9P35527 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.27■□□□□ 0.04
KRT9P35527 AC104073.2-201ENST00000453737 312 ntBASIC15.27■□□□□ 0.04
KRT9P35527 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.27■□□□□ 0.04
KRT9P35527 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT9P35527 AC106794.1-201ENST00000506935 792 ntBASIC15.27■□□□□ 0.04
KRT9P35527 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT9P35527 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.27■□□□□ 0.04
KRT9P35527 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.27■□□□□ 0.04
KRT9P35527 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.27■□□□□ 0.04
KRT9P35527 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT9P35527 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT9P35527 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT9P35527 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
KRT9P35527 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT9P35527 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT9P35527 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT9P35527 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
KRT9P35527 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
KRT9P35527 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT9P35527 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT9P35527 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT9P35527 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT9P35527 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT9P35527 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
KRT9P35527 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KRT9P35527 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT9P35527 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT9P35527 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT9P35527 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT9P35527 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms