Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDE6GP18545 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
PDE6GP18545 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDE6GP18545 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDE6GP18545 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PDE6GP18545 LRRC59-203ENST00000576448 1531 ntBASIC8.59□□□□□ -1.03
PDE6GP18545 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
PDE6GP18545 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDE6GP18545 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC8.59□□□□□ -1.03
PDE6GP18545 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDE6GP18545 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC8.59□□□□□ -1.03
PDE6GP18545 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDE6GP18545 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDE6GP18545 CTAGE10P-201ENST00000318353 2408 ntBASIC8.59□□□□□ -1.03
PDE6GP18545 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.04
PDE6GP18545 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
PDE6GP18545 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
PDE6GP18545 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.04
PDE6GP18545 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
PDE6GP18545 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 AC007952.5-201ENST00000572818 1486 ntBASIC8.58□□□□□ -1.04
PDE6GP18545 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC8.58□□□□□ -1.04
PDE6GP18545 MYO19-213ENST00000614623 4054 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
PDE6GP18545 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 PLEKHA7-211ENST00000531066 4561 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC8.58□□□□□ -1.04
PDE6GP18545 UNC45B-201ENST00000268876 5679 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC8.58□□□□□ -1.04
PDE6GP18545 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 APOA1-205ENST00000375329 927 ntTSL 2 BASIC8.58□□□□□ -1.04
PDE6GP18545 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
PDE6GP18545 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC8.58□□□□□ -1.04
PDE6GP18545 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC8.58□□□□□ -1.04
PDE6GP18545 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC8.58□□□□□ -1.04
PDE6GP18545 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC8.58□□□□□ -1.04
PDE6GP18545 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC8.58□□□□□ -1.04
PDE6GP18545 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC8.58□□□□□ -1.04
PDE6GP18545 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC8.58□□□□□ -1.04
PDE6GP18545 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC8.58□□□□□ -1.04
PDE6GP18545 AC018845.2-201ENST00000568326 409 ntBASIC8.58□□□□□ -1.04
PDE6GP18545 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC8.58□□□□□ -1.04
PDE6GP18545 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC8.58□□□□□ -1.04
PDE6GP18545 AL356740.1-201ENST00000602192 1297 ntBASIC8.58□□□□□ -1.04
PDE6GP18545 AC021016.3-201ENST00000608367 477 ntBASIC8.58□□□□□ -1.04
PDE6GP18545 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 EGLN3-205ENST00000547327 2849 ntBASIC8.58□□□□□ -1.04
PDE6GP18545 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC8.58□□□□□ -1.04
PDE6GP18545 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC8.58□□□□□ -1.04
PDE6GP18545 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC8.58□□□□□ -1.04
PDE6GP18545 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 ABCC5-201ENST00000265586 5712 ntTSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 AC008764.8-201ENST00000623966 2717 ntBASIC8.58□□□□□ -1.04
PDE6GP18545 PISD-203ENST00000397500 2194 ntTSL 5 BASIC8.58□□□□□ -1.04
PDE6GP18545 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDE6GP18545 STYX-201ENST00000354586 4857 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms