Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.09□□□□□ -0.15
VCLP18206 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.09□□□□□ -0.15
VCLP18206 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VCLP18206 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.09□□□□□ -0.15
VCLP18206 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VCLP18206 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
VCLP18206 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
VCLP18206 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
VCLP18206 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
VCLP18206 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.08□□□□□ -0.16
VCLP18206 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VCLP18206 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.08□□□□□ -0.16
VCLP18206 AC131902.2-201ENST00000566892 2172 ntBASIC14.08□□□□□ -0.16
VCLP18206 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.08□□□□□ -0.16
VCLP18206 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
VCLP18206 AC007274.2-201ENST00000421675 662 ntBASIC14.08□□□□□ -0.16
VCLP18206 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.08□□□□□ -0.16
VCLP18206 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.08□□□□□ -0.16
VCLP18206 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.08□□□□□ -0.16
VCLP18206 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.08□□□□□ -0.16
VCLP18206 RN7SL258P-201ENST00000478664 300 ntBASIC14.08□□□□□ -0.16
VCLP18206 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.08□□□□□ -0.16
VCLP18206 RN7SL277P-201ENST00000481521 288 ntBASIC14.08□□□□□ -0.16
VCLP18206 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.08□□□□□ -0.16
VCLP18206 RN7SL720P-201ENST00000488178 304 ntBASIC14.08□□□□□ -0.16
VCLP18206 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.08□□□□□ -0.16
VCLP18206 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
VCLP18206 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.08□□□□□ -0.16
VCLP18206 AC020922.3-201ENST00000595064 547 ntBASIC14.08□□□□□ -0.16
VCLP18206 AL353770.1-201ENST00000614915 403 ntBASIC14.08□□□□□ -0.16
VCLP18206 BAP1-211ENST00000615113 489 ntBASIC14.08□□□□□ -0.16
VCLP18206 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.08□□□□□ -0.16
VCLP18206 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
VCLP18206 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.08□□□□□ -0.16
VCLP18206 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.08□□□□□ -0.16
VCLP18206 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 KRT18P9-201ENST00000604826 1300 ntBASIC14.08□□□□□ -0.16
VCLP18206 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
VCLP18206 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
VCLP18206 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VCLP18206 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.07□□□□□ -0.16
VCLP18206 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.07□□□□□ -0.16
VCLP18206 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.07□□□□□ -0.16
VCLP18206 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.07□□□□□ -0.16
VCLP18206 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.07□□□□□ -0.16
VCLP18206 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.07□□□□□ -0.16
VCLP18206 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VCLP18206 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.07□□□□□ -0.16
VCLP18206 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 UPF3AP2-201ENST00000457924 1132 ntBASIC14.07□□□□□ -0.16
VCLP18206 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
VCLP18206 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.07□□□□□ -0.16
VCLP18206 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.07□□□□□ -0.16
VCLP18206 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.07□□□□□ -0.16
VCLP18206 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.07□□□□□ -0.16
VCLP18206 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 AL512310.5-201ENST00000551999 515 ntBASIC14.07□□□□□ -0.16
VCLP18206 AC093752.3-201ENST00000567343 901 ntBASIC14.07□□□□□ -0.16
VCLP18206 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.07□□□□□ -0.16
VCLP18206 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VCLP18206 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.07□□□□□ -0.16
VCLP18206 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.07□□□□□ -0.16
VCLP18206 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 LINC02486-201ENST00000604157 3000 ntBASIC14.07□□□□□ -0.16
VCLP18206 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VCLP18206 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms