Protein–RNA interactions for Protein: P0CW24

PNMA6A, Paraneoplastic antigen-like protein 6A, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6AP0CW24 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 PCDHA5-203ENST00000614258 4248 ntBASIC15.26■□□□□ 0.03
PNMA6AP0CW24 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 DPM3-202ENST00000368399 517 ntBASIC15.26■□□□□ 0.03
PNMA6AP0CW24 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 HMGA1P1-201ENST00000415560 1062 ntBASIC15.26■□□□□ 0.03
PNMA6AP0CW24 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 POM121L10P-201ENST00000436994 1285 ntBASIC15.26■□□□□ 0.03
PNMA6AP0CW24 AC044849.1-201ENST00000519737 1188 ntBASIC15.26■□□□□ 0.03
PNMA6AP0CW24 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 AC091271.1-201ENST00000611877 1162 ntBASIC15.26■□□□□ 0.03
PNMA6AP0CW24 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 RCC2P1-201ENST00000452257 1476 ntBASIC15.26■□□□□ 0.03
PNMA6AP0CW24 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 LINC01815-202ENST00000641468 1409 ntBASIC15.26■□□□□ 0.03
PNMA6AP0CW24 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC15.26■□□□□ 0.03
PNMA6AP0CW24 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 LINC00638-201ENST00000555578 2518 ntBASIC15.25■□□□□ 0.03
PNMA6AP0CW24 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.25■□□□□ 0.03
PNMA6AP0CW24 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 AK2P2-201ENST00000439142 405 ntBASIC15.25■□□□□ 0.03
PNMA6AP0CW24 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 AC009779.1-201ENST00000551138 283 ntBASIC15.25■□□□□ 0.03
PNMA6AP0CW24 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 AC104758.3-203ENST00000562938 2123 ntBASIC15.25■□□□□ 0.03
PNMA6AP0CW24 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC15.25■□□□□ 0.03
PNMA6AP0CW24 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PNMA6AP0CW24 TNRC18P1-201ENST00000502875 3650 ntBASIC15.24■□□□□ 0.03
PNMA6AP0CW24 BRD7P5-201ENST00000299197 1822 ntBASIC15.24■□□□□ 0.03
PNMA6AP0CW24 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PNMA6AP0CW24 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PNMA6AP0CW24 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC15.24■□□□□ 0.03
PNMA6AP0CW24 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PNMA6AP0CW24 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.24■□□□□ 0.03
PNMA6AP0CW24 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PNMA6AP0CW24 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC15.24■□□□□ 0.03
PNMA6AP0CW24 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.24■□□□□ 0.03
PNMA6AP0CW24 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PNMA6AP0CW24 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.24■□□□□ 0.03
PNMA6AP0CW24 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PNMA6AP0CW24 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms