Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.01□□□□□ -0.17
APOA4P06727 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
APOA4P06727 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.01□□□□□ -0.17
APOA4P06727 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOA4P06727 PTPRVP-205ENST00000641549 5067 ntBASIC14.01□□□□□ -0.17
APOA4P06727 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
APOA4P06727 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 RPL13AP3-202ENST00000494676 1473 ntBASIC14□□□□□ -0.17
APOA4P06727 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
APOA4P06727 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
APOA4P06727 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
APOA4P06727 LINC01815-202ENST00000641468 1409 ntBASIC14□□□□□ -0.17
APOA4P06727 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14□□□□□ -0.17
APOA4P06727 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC14□□□□□ -0.17
APOA4P06727 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14□□□□□ -0.17
APOA4P06727 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14□□□□□ -0.17
APOA4P06727 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 AC026271.4-201ENST00000578214 1833 ntBASIC14□□□□□ -0.17
APOA4P06727 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14□□□□□ -0.17
APOA4P06727 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14□□□□□ -0.17
APOA4P06727 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 AC239868.1-201ENST00000369385 493 ntBASIC14□□□□□ -0.17
APOA4P06727 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14□□□□□ -0.17
APOA4P06727 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14□□□□□ -0.17
APOA4P06727 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14□□□□□ -0.17
APOA4P06727 BX284668.4-201ENST00000453917 508 ntBASIC14□□□□□ -0.17
APOA4P06727 AKR7A2P1-201ENST00000460134 915 ntBASIC14□□□□□ -0.17
APOA4P06727 AC099548.2-209ENST00000480264 625 ntBASIC14□□□□□ -0.17
APOA4P06727 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14□□□□□ -0.17
APOA4P06727 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14□□□□□ -0.17
APOA4P06727 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14□□□□□ -0.17
APOA4P06727 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 MIR4525-201ENST00000580000 75 ntBASIC14□□□□□ -0.17
APOA4P06727 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 NDUFV2P1-201ENST00000596415 907 ntBASIC14□□□□□ -0.17
APOA4P06727 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14□□□□□ -0.17
APOA4P06727 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
APOA4P06727 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
APOA4P06727 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
APOA4P06727 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14□□□□□ -0.17
APOA4P06727 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 CR383656.2-201ENST00000548656 2254 ntBASIC14□□□□□ -0.17
APOA4P06727 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14□□□□□ -0.17
APOA4P06727 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14□□□□□ -0.17
APOA4P06727 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
APOA4P06727 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14□□□□□ -0.17
APOA4P06727 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14□□□□□ -0.17
APOA4P06727 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
APOA4P06727 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14□□□□□ -0.17
APOA4P06727 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14□□□□□ -0.17
APOA4P06727 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14□□□□□ -0.17
APOA4P06727 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOA4P06727 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14□□□□□ -0.17
APOA4P06727 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14□□□□□ -0.17
APOA4P06727 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APOA4P06727 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOA4P06727 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOA4P06727 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA4P06727 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
APOA4P06727 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA4P06727 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APOA4P06727 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.99□□□□□ -0.17
APOA4P06727 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.99□□□□□ -0.17
APOA4P06727 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOA4P06727 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APOA4P06727 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA4P06727 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA4P06727 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APOA4P06727 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA4P06727 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.99□□□□□ -0.17
APOA4P06727 FRMPD2B-201ENST00000431305 1347 ntBASIC13.99□□□□□ -0.17
APOA4P06727 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOA4P06727 AP000437.1-201ENST00000624057 2085 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms