Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SMAD6O43541 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.98□□□□□ -0.17
SMAD6O43541 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.98□□□□□ -0.17
SMAD6O43541 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.98□□□□□ -0.17
SMAD6O43541 RPS23-207ENST00000511844 530 ntTSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC13.98□□□□□ -0.17
SMAD6O43541 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.98□□□□□ -0.17
SMAD6O43541 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.98□□□□□ -0.17
SMAD6O43541 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC13.98□□□□□ -0.17
SMAD6O43541 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
SMAD6O43541 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 PXK-210ENST00000479241 2817 ntTSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.98□□□□□ -0.17
SMAD6O43541 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC13.98□□□□□ -0.17
SMAD6O43541 AC020917.4-201ENST00000623994 1999 ntBASIC13.98□□□□□ -0.17
SMAD6O43541 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.98□□□□□ -0.17
SMAD6O43541 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMAD6O43541 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SMAD6O43541 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 FUCA1P1-201ENST00000374476 1351 ntBASIC13.97□□□□□ -0.17
SMAD6O43541 AGAP12P-201ENST00000585227 2359 ntBASIC13.97□□□□□ -0.17
SMAD6O43541 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SMAD6O43541 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.97□□□□□ -0.17
SMAD6O43541 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.97□□□□□ -0.17
SMAD6O43541 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC13.97□□□□□ -0.17
SMAD6O43541 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC13.97□□□□□ -0.17
SMAD6O43541 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.97□□□□□ -0.17
SMAD6O43541 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 MIR5196-201ENST00000578146 115 ntBASIC13.97□□□□□ -0.17
SMAD6O43541 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC13.97□□□□□ -0.17
SMAD6O43541 AL356740.1-201ENST00000602192 1297 ntBASIC13.97□□□□□ -0.17
SMAD6O43541 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.97□□□□□ -0.17
SMAD6O43541 MIR8071-1-201ENST00000616769 65 ntBASIC13.97□□□□□ -0.17
SMAD6O43541 MIR8071-2-201ENST00000616772 65 ntBASIC13.97□□□□□ -0.17
SMAD6O43541 MIR6727-201ENST00000620702 65 ntBASIC13.97□□□□□ -0.17
SMAD6O43541 AC138466.5-201ENST00000624002 808 ntBASIC13.97□□□□□ -0.17
SMAD6O43541 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.97□□□□□ -0.17
SMAD6O43541 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.97□□□□□ -0.17
SMAD6O43541 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.97□□□□□ -0.17
SMAD6O43541 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.97□□□□□ -0.17
SMAD6O43541 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMAD6O43541 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms