Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
O00370 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
O00370 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.86□□□□□ -0.03
O00370 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.86□□□□□ -0.03
O00370 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.86□□□□□ -0.03
O00370 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
O00370 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
O00370 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.86□□□□□ -0.03
O00370 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.86□□□□□ -0.03
O00370 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
O00370 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.85□□□□□ -0.03
O00370 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
O00370 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.85□□□□□ -0.03
O00370 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
O00370 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.85□□□□□ -0.03
O00370 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
O00370 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
O00370 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.85□□□□□ -0.03
O00370 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
O00370 AC025183.3-201ENST00000623526 1482 ntBASIC14.85□□□□□ -0.03
O00370 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.85□□□□□ -0.03
O00370 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.85□□□□□ -0.03
O00370 RN7SL788P-201ENST00000460504 316 ntBASIC14.85□□□□□ -0.03
O00370 RN7SL769P-201ENST00000469386 295 ntBASIC14.85□□□□□ -0.03
O00370 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.85□□□□□ -0.03
O00370 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
O00370 AC105129.2-201ENST00000559536 390 ntBASIC14.85□□□□□ -0.03
O00370 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.85□□□□□ -0.03
O00370 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.85□□□□□ -0.03
O00370 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.85□□□□□ -0.03
O00370 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
O00370 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.85□□□□□ -0.03
O00370 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
O00370 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.85□□□□□ -0.03
O00370 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.85□□□□□ -0.03
O00370 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
O00370 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.85□□□□□ -0.03
O00370 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
O00370 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
O00370 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
O00370 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.84□□□□□ -0.03
O00370 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
O00370 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.84□□□□□ -0.03
O00370 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.84□□□□□ -0.03
O00370 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 LINC00638-201ENST00000555578 2518 ntBASIC14.84□□□□□ -0.03
O00370 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
O00370 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
O00370 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.84□□□□□ -0.03
O00370 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.84□□□□□ -0.03
O00370 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.84□□□□□ -0.03
O00370 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.84□□□□□ -0.03
O00370 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.84□□□□□ -0.03
O00370 SNORA50C-201ENST00000408535 133 ntBASIC14.84□□□□□ -0.03
O00370 UPF3AP2-201ENST00000457924 1132 ntBASIC14.84□□□□□ -0.03
O00370 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.84□□□□□ -0.03
O00370 IGLV3-15-201ENST00000518356 244 ntBASIC14.84□□□□□ -0.03
O00370 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.84□□□□□ -0.03
O00370 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.84□□□□□ -0.03
O00370 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
O00370 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.84□□□□□ -0.03
O00370 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 AL161773.1-201ENST00000624845 863 ntBASIC14.84□□□□□ -0.03
O00370 SNORA50.1-201ENST00000628590 135 ntBASIC14.84□□□□□ -0.03
O00370 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms