Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 SNU13-204ENST00000402458 462 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 RPSAP12-201ENST00000435879 888 ntBASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 SERBP1P2-201ENST00000436888 1164 ntBASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 AC027612.2-202ENST00000445955 1199 ntBASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 AC015818.1-201ENST00000451011 244 ntBASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 EMC4-208ENST00000559078 599 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 AL590235.1-201ENST00000564650 861 ntBASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC187A0A096LP49 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 HLA-DMA-202ENST00000395303 1007 ntBASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AC103563.1-201ENST00000429316 123 ntBASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AC092810.2-201ENST00000431570 362 ntBASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 MIR2278-201ENST00000516344 96 ntBASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 FBXO36P1-201ENST00000579006 471 ntBASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AL359183.1-201ENST00000623796 2132 ntBASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AC020931.1-201ENST00000589622 1346 ntBASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.11□□□□□ -0.31
CCDC187A0A096LP49 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms