Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 AC108734.2-201ENST00000420887 1069 ntBASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 RN7SL23P-201ENST00000484055 275 ntBASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 AC100858.1-201ENST00000514059 1228 ntBASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 MIR4326-201ENST00000582203 59 ntBASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 AL118522.1-201ENST00000611368 560 ntBASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 NRADDP-202ENST00000641269 1585 ntBASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 SALL4P6-201ENST00000429385 1691 ntBASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.88■□□□□ 0.29
HMG20BQ9P0W2 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 AC021305.1-201ENST00000520656 1514 ntBASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 MIR1307-201ENST00000408840 149 ntBASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 AC073210.1-201ENST00000414799 232 ntBASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 AC084752.1-201ENST00000509766 622 ntBASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 AC009084.3-201ENST00000623356 437 ntBASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 AC025271.4-201ENST00000621477 1726 ntBASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 AC135782.3-201ENST00000562782 2105 ntBASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMG20BQ9P0W2 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 AC009474.1-201ENST00000455096 1565 ntBASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 ABCD1P2-201ENST00000429313 1601 ntBASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 GGTLC4P-201ENST00000402176 664 ntBASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 AL627389.1-201ENST00000413508 1182 ntBASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 ACTG1P19-201ENST00000418987 1116 ntBASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 AC093300.1-201ENST00000510368 1201 ntBASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.86■□□□□ 0.29
HMG20BQ9P0W2 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms