Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 RN7SL850P-201ENST00000579959 291 ntBASIC8.21□□□□□ -1.1
SVIPQ8NHG7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 LMOD1-202ENST00000616739 3058 ntTSL 5 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 RRAGB-201ENST00000262850 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 AL449283.1-201ENST00000602631 3403 ntBASIC8.21□□□□□ -1.1
SVIPQ8NHG7 RBM23-202ENST00000346528 2361 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 AC233968.1-201ENST00000611212 1300 ntBASIC8.21□□□□□ -1.1
SVIPQ8NHG7 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 SRSF10-203ENST00000343255 2917 ntAPPRIS ALT1 TSL 2 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 FAM181A-AS1-202ENST00000554742 2402 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 ACTR1A-205ENST00000487599 2726 ntTSL 5 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 KDM5D-201ENST00000317961 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 ARHGAP6-205ENST00000380736 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 TYW1-201ENST00000359626 3348 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 PAX8-201ENST00000263334 4152 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 TRIM36-207ENST00000513154 4218 ntTSL 2 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 FAM13C-201ENST00000422313 1963 ntTSL 5 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 TYRP1-203ENST00000388918 2851 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 SLC17A8-202ENST00000392989 1737 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 C3P1-201ENST00000495140 3526 ntTSL 5 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 TTC28-201ENST00000397906 11795 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 AC010201.2-201ENST00000605595 1495 ntBASIC8.2□□□□□ -1.1
SVIPQ8NHG7 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 AL136982.1-201ENST00000444431 4560 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 AC007277.1-201ENST00000428156 2189 ntTSL 2 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 ABCF2P1-201ENST00000465687 1867 ntBASIC8.2□□□□□ -1.1
SVIPQ8NHG7 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 CDHR2-201ENST00000261944 4068 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 RAD51-202ENST00000382643 1588 ntTSL 2 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 UIMC1-212ENST00000511320 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 FAM193A-204ENST00000505311 4110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 RNU6-775P-201ENST00000459318 96 ntBASIC8.2□□□□□ -1.1
SVIPQ8NHG7 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 GMDS-AS1-213ENST00000534441 738 ntTSL 3 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 AP000753.1-201ENST00000542805 573 ntTSL 4 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 AC009065.8-201ENST00000565709 788 ntTSL 5 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 AP005212.4-201ENST00000614206 710 ntBASIC8.2□□□□□ -1.1
SVIPQ8NHG7 AL023803.2-201ENST00000620080 638 ntBASIC8.2□□□□□ -1.1
SVIPQ8NHG7 Z99916.3-201ENST00000623422 1080 ntBASIC8.2□□□□□ -1.1
SVIPQ8NHG7 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 SRGAP2-215ENST00000605610 3212 ntTSL 2 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 RRP12-203ENST00000414986 4242 ntAPPRIS ALT1 TSL 2 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 AC135279.3-201ENST00000610945 1311 ntBASIC8.2□□□□□ -1.1
SVIPQ8NHG7 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 AP003716.1-202ENST00000511677 3387 ntTSL 2 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 RAE1-201ENST00000371242 2362 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 SERPINA5-203ENST00000553780 2071 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 BSND-201ENST00000371265 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 MAST4-201ENST00000261569 7664 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
SVIPQ8NHG7 SNX33P1-201ENST00000592116 1762 ntBASIC8.2□□□□□ -1.1
SVIPQ8NHG7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SVIPQ8NHG7 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SVIPQ8NHG7 STK31-202ENST00000355870 3326 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SVIPQ8NHG7 AC020928.1-201ENST00000590750 1850 ntTSL 2 BASIC8.19□□□□□ -1.1
SVIPQ8NHG7 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC8.19□□□□□ -1.1
SVIPQ8NHG7 UST-201ENST00000367463 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SVIPQ8NHG7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SVIPQ8NHG7 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SVIPQ8NHG7 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SVIPQ8NHG7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms