Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RP1L1Q8IWN7 LINC00115-201ENST00000473798 1317 ntBASIC12.69□□□□□ -0.38
RP1L1Q8IWN7 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RP1L1Q8IWN7 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.69□□□□□ -0.38
RP1L1Q8IWN7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 PTGER4P2-201ENST00000328411 252 ntBASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 PTGER4P3-201ENST00000458150 252 ntBASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 AL590235.1-201ENST00000564650 861 ntBASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 PKP2-202ENST00000340811 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 AC015818.9-201ENST00000591705 4582 ntBASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 RN7SL147P-201ENST00000487345 298 ntBASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 AC147876.1-201ENST00000504408 322 ntBASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 EEF1GP8-201ENST00000506566 1154 ntBASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 NDUFB10P1-201ENST00000567319 521 ntBASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 GRM4-205ENST00000538487 4153 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RP1L1Q8IWN7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 AC106827.1-201ENST00000366454 431 ntBASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 NQO2-204ENST00000380454 851 ntTSL 2 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 MIR2278-201ENST00000516344 96 ntBASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 OR3A1-202ENST00000615105 966 ntBASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 AC005274.1-201ENST00000623460 802 ntBASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 AJ011931.1-201ENST00000618749 2492 ntBASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms