Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 POP5-201ENST00000341039 913 ntTSL 2 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 OR2T32P-201ENST00000403423 963 ntBASIC17.09■□□□□ 0.33
RC3H1Q5TC82 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 ASLP1-201ENST00000428790 637 ntBASIC17.09■□□□□ 0.33
RC3H1Q5TC82 POLR2LP1-206ENST00000444785 187 ntBASIC17.09■□□□□ 0.33
RC3H1Q5TC82 BICD1P1-201ENST00000457832 1222 ntBASIC17.09■□□□□ 0.33
RC3H1Q5TC82 AK2-208ENST00000487289 920 ntTSL 2 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 EMP3-204ENST00000596315 761 ntTSL 2 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 AC009812.1-201ENST00000605948 1059 ntBASIC17.09■□□□□ 0.33
RC3H1Q5TC82 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RC3H1Q5TC82 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RC3H1Q5TC82 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
RC3H1Q5TC82 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
RC3H1Q5TC82 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RC3H1Q5TC82 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
RC3H1Q5TC82 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC17.08■□□□□ 0.33
RC3H1Q5TC82 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RC3H1Q5TC82 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RC3H1Q5TC82 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RC3H1Q5TC82 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.08■□□□□ 0.33
RC3H1Q5TC82 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 AC011239.2-201ENST00000624820 1489 ntBASIC17.08■□□□□ 0.32
RC3H1Q5TC82 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 HMGA1P2-201ENST00000430198 324 ntBASIC17.08■□□□□ 0.32
RC3H1Q5TC82 TULP3P1-202ENST00000453253 1291 ntBASIC17.08■□□□□ 0.32
RC3H1Q5TC82 RPL3P9-201ENST00000463217 1183 ntBASIC17.08■□□□□ 0.32
RC3H1Q5TC82 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 AL031768.1-201ENST00000606542 701 ntBASIC17.08■□□□□ 0.32
RC3H1Q5TC82 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RC3H1Q5TC82 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 OR7E12P-201ENST00000344740 973 ntBASIC17.07■□□□□ 0.32
RC3H1Q5TC82 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 RNASEH2CP1-201ENST00000454281 502 ntBASIC17.07■□□□□ 0.32
RC3H1Q5TC82 AC010395.2-201ENST00000509899 904 ntBASIC17.07■□□□□ 0.32
RC3H1Q5TC82 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 AC010601.2-201ENST00000623060 774 ntBASIC17.07■□□□□ 0.32
RC3H1Q5TC82 Z82244.2-201ENST00000632196 448 ntBASIC17.07■□□□□ 0.32
RC3H1Q5TC82 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 MARK2P9-201ENST00000430958 1727 ntBASIC17.07■□□□□ 0.32
RC3H1Q5TC82 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RC3H1Q5TC82 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms