Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 AC110048.1-201ENST00000604293 2157 ntBASIC12.16□□□□□ -0.46
UBA52P62987 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.16□□□□□ -0.46
UBA52P62987 AL355102.3-201ENST00000554299 1678 ntBASIC12.16□□□□□ -0.46
UBA52P62987 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
UBA52P62987 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
UBA52P62987 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
UBA52P62987 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.15□□□□□ -0.46
UBA52P62987 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
UBA52P62987 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.15□□□□□ -0.46
UBA52P62987 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 AL158070.2-201ENST00000623713 1621 ntBASIC12.15□□□□□ -0.46
UBA52P62987 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.15□□□□□ -0.46
UBA52P62987 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
UBA52P62987 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
UBA52P62987 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
UBA52P62987 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.15□□□□□ -0.46
UBA52P62987 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.15□□□□□ -0.46
UBA52P62987 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
UBA52P62987 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.15□□□□□ -0.46
UBA52P62987 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.15□□□□□ -0.46
UBA52P62987 AL008707.1-201ENST00000422498 534 ntBASIC12.15□□□□□ -0.46
UBA52P62987 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.15□□□□□ -0.46
UBA52P62987 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.15□□□□□ -0.46
UBA52P62987 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC12.15□□□□□ -0.46
UBA52P62987 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.15□□□□□ -0.46
UBA52P62987 MIR6074-201ENST00000612054 107 ntBASIC12.15□□□□□ -0.46
UBA52P62987 AP001505.2-201ENST00000616815 443 ntBASIC12.15□□□□□ -0.46
UBA52P62987 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.15□□□□□ -0.46
UBA52P62987 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.15□□□□□ -0.46
UBA52P62987 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
UBA52P62987 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.15□□□□□ -0.46
UBA52P62987 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
UBA52P62987 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.15□□□□□ -0.46
UBA52P62987 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
UBA52P62987 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.15□□□□□ -0.46
UBA52P62987 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
UBA52P62987 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.15□□□□□ -0.47
UBA52P62987 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
UBA52P62987 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
UBA52P62987 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
UBA52P62987 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
UBA52P62987 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.15□□□□□ -0.47
UBA52P62987 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
UBA52P62987 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
UBA52P62987 KRT8P4-201ENST00000509735 1454 ntBASIC12.14□□□□□ -0.47
UBA52P62987 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.14□□□□□ -0.47
UBA52P62987 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
UBA52P62987 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
UBA52P62987 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.14□□□□□ -0.47
UBA52P62987 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.14□□□□□ -0.47
UBA52P62987 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.14□□□□□ -0.47
UBA52P62987 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
UBA52P62987 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
UBA52P62987 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.14□□□□□ -0.47
UBA52P62987 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.14□□□□□ -0.47
UBA52P62987 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.14□□□□□ -0.47
UBA52P62987 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms